Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 NPM1P40-201ENST00000412758 733 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 RPS4XP5-201ENST00000419038 768 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL136231.1-201ENST00000429407 730 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 NDUFA5P10-201ENST00000432147 357 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 CASP3P1-201ENST00000446037 609 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 LDHBP2-201ENST00000456969 1005 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC004129.2-201ENST00000457229 287 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC007537.2-201ENST00000472093 511 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC074087.1-201ENST00000512059 724 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC034244.2-201ENST00000514668 858 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 HMGB1P42-201ENST00000532126 553 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC087888.1-201ENST00000550884 1254 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AF230666.2-201ENST00000602328 725 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 ABI1P1-201ENST00000603375 1120 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC145423.1-201ENST00000605712 336 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC092159.4-201ENST00000624944 550 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC006206.1-201ENST00000544842 3387 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 AC109446.4-201ENST00000623235 2755 ntBASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PDLIM3Q53GG5 MAPK10-338ENST00000641647 3362 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 SMG1P6-201ENST00000532337 2930 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 PABPC1P6-201ENST00000445594 1829 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 RNU1-150P-201ENST00000362491 162 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 SNORA63.3-201ENST00000362682 132 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 RN7SKP224-201ENST00000364140 325 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 RNU6-1176P-201ENST00000390955 107 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AL645733.1-201ENST00000402250 217 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AL132875.1-201ENST00000403623 949 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 RPL35AP3-201ENST00000414680 288 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC019205.1-201ENST00000421830 730 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 OR6K4P-201ENST00000423179 955 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 BX323845.3-201ENST00000428215 527 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 PA2G4P6-201ENST00000438325 1197 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 VN1R110P-201ENST00000438988 971 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AL512605.1-202ENST00000441919 381 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 RNF2P1-201ENST00000442955 1010 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AL359955.2-201ENST00000445380 353 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC005532.2-201ENST00000467154 373 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC078857.1-201ENST00000469870 667 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC092865.4-201ENST00000477936 615 ntBASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.68□□□□□ -1.66
PDLIM3Q53GG5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms