Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC016687.1-201ENST00000482574 353 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 RN7SL558P-201ENST00000497468 299 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC140172.1-201ENST00000502928 141 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC113398.2-201ENST00000507630 558 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC110775.1-201ENST00000513721 462 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 SNORD116-30-201ENST00000516468 85 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 MORF4L1P3-201ENST00000525966 950 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 GCSHP4-201ENST00000538792 439 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC084033.1-201ENST00000550830 633 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AL049839.1-201ENST00000556151 657 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AL445222.1-201ENST00000607259 628 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AP001521.2-201ENST00000608772 546 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC007497.1-201ENST00000610421 561 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC009163.6-201ENST00000612367 342 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC073575.2-201ENST00000614212 627 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AP002799.1-201ENST00000623552 423 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AL353662.3-201ENST00000625131 237 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC006453.5-201ENST00000636451 619 ntBASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RSPO1Q2MKA7 DDX18P6-201ENST00000450119 1997 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 DDX18P5-201ENST00000534547 1306 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 SMG1P6-201ENST00000532337 2930 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 HMGB3P7-201ENST00000400214 611 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AP002530.1-201ENST00000405705 684 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AL691447.1-201ENST00000419456 387 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 RN7SL177P-201ENST00000476596 299 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 RPSAP50-201ENST00000481955 852 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 RN7SL808P-201ENST00000496066 299 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC008676.3-201ENST00000521237 435 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC008033.2-201ENST00000542626 177 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AC087763.1-201ENST00000603391 286 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 AL121612.2-201ENST00000612261 482 ntBASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RSPO1Q2MKA7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CASC19-206ENST00000641028 1430 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 SCARNA15-201ENST00000607520 4325 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 RN7SKP104-201ENST00000362605 328 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 RNA5SP123-201ENST00000363244 119 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CHMP1B2P-201ENST00000399581 597 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 AL021331.1-201ENST00000402817 582 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 RNU4-34P-201ENST00000410431 124 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CASKP1-201ENST00000412870 582 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 RPL23AP27-201ENST00000415161 451 ntBASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.22□□□□□ -1.73
RSPO1Q2MKA7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms