Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AP000894.4-201ENST00000610185 483 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AC126915.2-201ENST00000610957 190 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AC090527.3-201ENST00000619041 548 ntBASIC4.46□□□□□ -1.7
SRP9P49458 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.46□□□□□ -1.7
SRP9P49458 MTCO1P1-201ENST00000624263 1081 ntBASIC4.46□□□□□ -1.7
SRP9P49458 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SRP9P49458 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 AL672167.1-203ENST00000641299 2975 ntBASIC4.46□□□□□ -1.7
SRP9P49458 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SRP9P49458 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
SRP9P49458 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 PABPC1P6-201ENST00000445594 1829 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 SNORA17.1-201ENST00000362945 126 ntBASIC4.45□□□□□ -1.7
SRP9P49458 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 AL390316.1-201ENST00000406279 553 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AL512430.2-201ENST00000406786 339 ntBASIC4.45□□□□□ -1.7
SRP9P49458 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.45□□□□□ -1.7
SRP9P49458 RN7SKP125-201ENST00000410481 302 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.45□□□□□ -1.7
SRP9P49458 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 OR52B5P-201ENST00000435337 951 ntBASIC4.45□□□□□ -1.7
SRP9P49458 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.45□□□□□ -1.7
SRP9P49458 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.45□□□□□ -1.7
SRP9P49458 AC074386.1-201ENST00000476560 767 ntBASIC4.45□□□□□ -1.7
SRP9P49458 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 RNA5SP373-201ENST00000517271 95 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AF186190.1-201ENST00000517470 480 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.45□□□□□ -1.7
SRP9P49458 AGGF1P9-201ENST00000561884 913 ntBASIC4.45□□□□□ -1.7
SRP9P49458 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.45□□□□□ -1.7
SRP9P49458 MIR1269B-201ENST00000580405 75 ntBASIC4.45□□□□□ -1.7
SRP9P49458 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.45□□□□□ -1.7
SRP9P49458 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AC131238.1-201ENST00000617135 328 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AP002505.2-201ENST00000623585 696 ntBASIC4.45□□□□□ -1.7
SRP9P49458 OR52B5P-202ENST00000641118 1110 ntBASIC4.45□□□□□ -1.7
SRP9P49458 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.45□□□□□ -1.7
SRP9P49458 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.45□□□□□ -1.7
SRP9P49458 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
SRP9P49458 VN2R3P-201ENST00000422626 1412 ntBASIC4.45□□□□□ -1.7
SRP9P49458 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
SRP9P49458 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
SRP9P49458 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SRP9P49458 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SRP9P49458 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 CASC19-204ENST00000641001 2055 ntBASIC4.44□□□□□ -1.7
SRP9P49458 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.44□□□□□ -1.7
SRP9P49458 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SRP9P49458 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.44□□□□□ -1.7
SRP9P49458 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SRP9P49458 RNA5SP90-201ENST00000364801 99 ntBASIC4.44□□□□□ -1.7
SRP9P49458 RNU1-43P-201ENST00000365052 165 ntBASIC4.44□□□□□ -1.7
SRP9P49458 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 RNU1-74P-201ENST00000384108 171 ntBASIC4.44□□□□□ -1.7
SRP9P49458 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 EIF4A1P1-201ENST00000420241 934 ntBASIC4.44□□□□□ -1.7
SRP9P49458 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.44□□□□□ -1.7
SRP9P49458 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.44□□□□□ -1.7
SRP9P49458 AL163193.1-201ENST00000444895 788 ntBASIC4.44□□□□□ -1.7
SRP9P49458 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 FAR2P1-206ENST00000449736 709 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SRP9P49458 AC093166.2-201ENST00000455969 1017 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AC079841.1-201ENST00000481228 950 ntBASIC4.44□□□□□ -1.7
SRP9P49458 RN7SL629P-201ENST00000489622 285 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AC073358.1-201ENST00000505671 684 ntBASIC4.44□□□□□ -1.7
SRP9P49458 HIGD1AP14-201ENST00000507617 282 ntBASIC4.44□□□□□ -1.7
SRP9P49458 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AC022832.1-201ENST00000530718 645 ntBASIC4.44□□□□□ -1.7
SRP9P49458 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 AC005868.1-201ENST00000536421 331 ntBASIC4.44□□□□□ -1.7
SRP9P49458 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
SRP9P49458 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.44□□□□□ -1.7
SRP9P49458 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.44□□□□□ -1.7
SRP9P49458 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms