Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RPL7P4-203ENST00000430239 730 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC022022.1-201ENST00000430304 178 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC242426.1-201ENST00000435270 960 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC128677.1-201ENST00000436016 442 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 AL031667.1-201ENST00000440222 725 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC245291.3-201ENST00000443400 292 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 SNRPBP1-201ENST00000443634 282 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC010307.1-201ENST00000467206 836 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AL355032.1-201ENST00000472981 438 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC104763.1-201ENST00000475274 360 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 SNX18P23-201ENST00000510867 677 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 TCP11X3P-202ENST00000514289 1254 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 RNA5SP135-201ENST00000517019 125 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC135983.3-201ENST00000528049 1226 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 PPIAP6-201ENST00000557078 499 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.02□□□□□ -1.45
HOXC12P31275 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXC12P31275 AC004908.1-201ENST00000606572 541 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AP002360.4-201ENST00000606980 481 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 AP004247.3-201ENST00000608682 624 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 ATE1-AS1-202ENST00000636460 506 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HOXC12P31275 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HOXC12P31275 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 AC110597.1-201ENST00000562669 3176 ntBASIC6.02□□□□□ -1.45
HOXC12P31275 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXC12P31275 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXC12P31275 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC015871.3-201ENST00000618835 2261 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC12P31275 IFIT1P1-201ENST00000400497 1449 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 DDX18P4-201ENST00000511690 1966 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AC092447.7-201ENST00000422212 1621 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 AC010894.1-201ENST00000313760 361 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXC12P31275 RNU6-374P-201ENST00000364146 108 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 SUGT1P2-201ENST00000379452 992 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXC12P31275 MIR199B-201ENST00000384849 110 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 RPL5P5-201ENST00000392009 893 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AL133264.1-201ENST00000407157 562 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 AL663061.1-201ENST00000416625 580 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AK4P4-201ENST00000419465 646 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 CDC42P6-201ENST00000421246 576 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 AHCYP8-201ENST00000425108 209 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 RPL5P34-201ENST00000426545 891 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.01□□□□□ -1.45
HOXC12P31275 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXC12P31275 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC12P31275 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXC12P31275 DEFA11P-201ENST00000446470 261 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 COX6CP12-201ENST00000446748 202 ntBASIC6.01□□□□□ -1.45
HOXC12P31275 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXC12P31275 RPS4XP15-201ENST00000489210 795 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms