Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPREP23469 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 OR2A20P-201ENST00000479887 2913 ntBASIC8.52□□□□□ -1.05
PTPREP23469 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
PTPREP23469 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
PTPREP23469 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 Y_RNA.257-201ENST00000364596 102 ntBASIC8.51□□□□□ -1.05
PTPREP23469 MIR217-201ENST00000384817 110 ntBASIC8.51□□□□□ -1.05
PTPREP23469 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
PTPREP23469 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 AL034417.1-201ENST00000399343 800 ntBASIC8.51□□□□□ -1.05
PTPREP23469 RN7SKP129-201ENST00000410288 299 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPREP23469 RPL7P57-201ENST00000423238 740 ntBASIC8.51□□□□□ -1.05
PTPREP23469 Z93242.1-201ENST00000427102 353 ntBASIC8.51□□□□□ -1.05
PTPREP23469 SKP1P3-201ENST00000429280 487 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 AL022324.2-201ENST00000434827 780 ntBASIC8.51□□□□□ -1.05
PTPREP23469 PSMD8P1-201ENST00000436275 769 ntBASIC8.51□□□□□ -1.05
PTPREP23469 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPREP23469 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 YWHAEP1-201ENST00000453697 763 ntBASIC8.51□□□□□ -1.05
PTPREP23469 RN7SL251P-201ENST00000464175 297 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPREP23469 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC8.51□□□□□ -1.05
PTPREP23469 AC084878.1-201ENST00000480555 648 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AC009153.1-201ENST00000485799 496 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 AL049870.4-201ENST00000555741 486 ntBASIC8.51□□□□□ -1.05
PTPREP23469 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 AC138749.2-201ENST00000566048 167 ntBASIC8.51□□□□□ -1.05
PTPREP23469 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 AC013244.1-201ENST00000604279 193 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AC092960.1-201ENST00000604762 351 ntBASIC8.51□□□□□ -1.05
PTPREP23469 BX323046.1-201ENST00000610145 535 ntBASIC8.51□□□□□ -1.05
PTPREP23469 AC233309.1-201ENST00000619522 751 ntBASIC8.51□□□□□ -1.05
PTPREP23469 uc_338.22-201ENST00000622722 187 ntBASIC8.51□□□□□ -1.05
PTPREP23469 Z69720.2-201ENST00000624755 279 ntBASIC8.51□□□□□ -1.05
PTPREP23469 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 MFSD8-218ENST00000641186 4448 ntBASIC8.51□□□□□ -1.05
PTPREP23469 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.51□□□□□ -1.05
PTPREP23469 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTPREP23469 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.51□□□□□ -1.05
PTPREP23469 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
PTPREP23469 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
PTPREP23469 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
PTPREP23469 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
PTPREP23469 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
PTPREP23469 AC068050.1-201ENST00000394891 380 ntBASIC8.5□□□□□ -1.05
PTPREP23469 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.5□□□□□ -1.05
PTPREP23469 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.5□□□□□ -1.05
PTPREP23469 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.5□□□□□ -1.05
PTPREP23469 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.5□□□□□ -1.05
PTPREP23469 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.5□□□□□ -1.05
PTPREP23469 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 RBPJP7-201ENST00000442803 1447 ntBASIC8.5□□□□□ -1.05
PTPREP23469 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC8.5□□□□□ -1.05
PTPREP23469 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.5□□□□□ -1.05
PTPREP23469 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC8.5□□□□□ -1.05
PTPREP23469 RBPJP5-201ENST00000449433 1447 ntBASIC8.5□□□□□ -1.05
PTPREP23469 NPM1P39-201ENST00000449818 867 ntBASIC8.5□□□□□ -1.05
PTPREP23469 RNU6-329P-201ENST00000459618 107 ntBASIC8.5□□□□□ -1.05
PTPREP23469 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.5□□□□□ -1.05
PTPREP23469 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PTPREP23469 AC092349.1-201ENST00000504903 310 ntBASIC8.5□□□□□ -1.05
PTPREP23469 CDV3-208ENST00000511392 554 ntTSL 5 BASIC8.5□□□□□ -1.05
PTPREP23469 AC011352.2-201ENST00000514574 1016 ntBASIC8.5□□□□□ -1.05
PTPREP23469 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms