Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HLA-DPB1P04440 AC235565.1-201ENST00000456962 1325 ntBASIC4.45□□□□□ -1.7
HLA-DPB1P04440 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC068870.3-201ENST00000625077 2536 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AL672167.1-205ENST00000641112 3080 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC008549.2-201ENST00000333482 706 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 U3.3-201ENST00000362986 216 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 SNORA73.1-201ENST00000363107 205 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 DUTP5-201ENST00000406790 469 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AP000534.2-201ENST00000412729 568 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AL355433.1-201ENST00000422804 300 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 EI24P4-201ENST00000423683 1078 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 ARL4AP3-201ENST00000441452 574 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AURKAPS1-201ENST00000451805 1212 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 RN7SL517P-201ENST00000462240 305 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC009127.1-201ENST00000467090 155 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 COPS8P2-201ENST00000473228 627 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC072052.1-201ENST00000496556 306 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 HMGB1P19-201ENST00000517578 577 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 OR11J2P-201ENST00000555298 907 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 IMMP1LP1-201ENST00000605170 488 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC126915.2-201ENST00000610957 190 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AL512624.1-201ENST00000613638 469 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 MAPK10-303ENST00000641324 3959 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC021242.1-201ENST00000507315 2035 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC133552.1-201ENST00000569988 4007 ntBASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DPB1P04440 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 RN7SKP126-201ENST00000411143 300 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AL450023.3-201ENST00000440592 271 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 FAR2P1-206ENST00000449736 709 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 RN7SL172P-201ENST00000460535 303 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC022795.1-201ENST00000473808 480 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 RPS18P6-201ENST00000476880 458 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 RN7SL30P-201ENST00000488416 306 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 GOLGA5P1-201ENST00000507317 980 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 HIGD1AP14-201ENST00000507617 282 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 KCTD9P6-201ENST00000522306 950 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms