Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC127526.2-201ENST00000426436 775 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC104843.2-201ENST00000427666 297 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AC074367.1-201ENST00000438685 1125 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 SCAND3P1-201ENST00000439854 1060 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.96□□□□□ -1.62
CLPTM1O96005 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 MRPL35P2-201ENST00000448009 511 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.96□□□□□ -1.62
CLPTM1O96005 RPSAP37-201ENST00000470913 821 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 RPL32P33-201ENST00000487023 394 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC022133.1-201ENST00000490961 571 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AC117525.1-201ENST00000515228 503 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 SCARNA6.1-201ENST00000516989 238 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AC022360.1-201ENST00000521058 340 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.96□□□□□ -1.62
CLPTM1O96005 AP003049.1-201ENST00000529418 457 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.96□□□□□ -1.62
CLPTM1O96005 CR383656.14-201ENST00000551951 406 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.96□□□□□ -1.62
CLPTM1O96005 OR11H3P-201ENST00000554547 982 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.96□□□□□ -1.62
CLPTM1O96005 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 AC135068.5-201ENST00000624197 983 ntBASIC4.96□□□□□ -1.62
CLPTM1O96005 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLPTM1O96005 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.96□□□□□ -1.62
CLPTM1O96005 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.96□□□□□ -1.62
CLPTM1O96005 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLPTM1O96005 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.95□□□□□ -1.62
CLPTM1O96005 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 UGT2B26P-201ENST00000508672 1613 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 CUL4AP1-201ENST00000514750 1863 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLPTM1O96005 RNU4-39P-201ENST00000362455 127 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 CCNB2P1-201ENST00000399411 1150 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 HMGB3P7-201ENST00000400214 611 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 HMGB1P20-201ENST00000402555 677 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 AC124944.2-201ENST00000429866 1242 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 RPS26P4-201ENST00000431743 355 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 RPL31P15-201ENST00000449770 338 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 MTND5P8-201ENST00000449817 1083 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 AC015908.1-201ENST00000478739 476 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.95□□□□□ -1.62
CLPTM1O96005 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.95□□□□□ -1.62
CLPTM1O96005 MTATP6P1-201ENST00000514057 681 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 OR8G3P-201ENST00000533406 921 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC134349.2-201ENST00000535136 910 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 MIR4260-201ENST00000583107 67 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 RN7SL52P-201ENST00000584271 284 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.95□□□□□ -1.62
CLPTM1O96005 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AL353600.1-201ENST00000608148 251 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC084036.1-201ENST00000609190 508 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 RN7SL787P-201ENST00000613000 284 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 RN7SL544P-201ENST00000617232 284 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 RN7SL763P-201ENST00000620922 284 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AC006249.1-201ENST00000621223 471 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 AP002967.1-201ENST00000624203 539 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.95□□□□□ -1.62
CLPTM1O96005 AL590396.2-201ENST00000636511 1041 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 MIR193BHG-214ENST00000641765 509 ntBASIC4.95□□□□□ -1.62
CLPTM1O96005 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CLPTM1O96005 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLPTM1O96005 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.95□□□□□ -1.62
CLPTM1O96005 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLPTM1O96005 AC005332.5-201ENST00000591222 2919 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms