Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNA5SP284-201ENST00000384547 118 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSSCA1O60232 RN7SKP126-201ENST00000411143 300 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 VDAC1P9-201ENST00000412766 841 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 SDHDP6-201ENST00000414693 480 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 TBCAP2-201ENST00000416175 326 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 Z74021.1-201ENST00000423610 407 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AL451139.1-201ENST00000434718 346 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AL589765.3-201ENST00000446084 462 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AC000111.2-201ENST00000448200 210 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 YWHAEP1-201ENST00000453697 763 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.89□□□□□ -1.79
SSSCA1O60232 RN7SL170P-201ENST00000487098 295 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC092349.1-201ENST00000504903 310 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 SNORD46.2-201ENST00000516021 102 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 RN7SKP260-201ENST00000516907 149 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC3.89□□□□□ -1.79
SSSCA1O60232 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 NMNAT1P1-201ENST00000554095 876 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.89□□□□□ -1.79
SSSCA1O60232 MIR7109-201ENST00000613748 65 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 MIR6071-201ENST00000616741 78 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC090527.3-201ENST00000619041 548 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.89□□□□□ -1.79
SSSCA1O60232 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SSSCA1O60232 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSSCA1O60232 AC017104.4-201ENST00000636283 1592 ntBASIC3.89□□□□□ -1.79
SSSCA1O60232 AC087190.4-201ENST00000574616 8334 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
SSSCA1O60232 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSSCA1O60232 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.88□□□□□ -1.79
SSSCA1O60232 CYCSP10-201ENST00000417973 294 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 OR7E125P-201ENST00000443450 846 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AC116562.1-201ENST00000485355 781 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.88□□□□□ -1.79
SSSCA1O60232 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.88□□□□□ -1.79
SSSCA1O60232 AL049839.1-201ENST00000556151 657 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AC011270.1-201ENST00000558606 583 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 TVP23CP2-201ENST00000571473 623 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AC027455.1-201ENST00000574104 594 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.88□□□□□ -1.79
SSSCA1O60232 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.88□□□□□ -1.79
SSSCA1O60232 AC027243.2-201ENST00000602530 724 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 AC233280.2-201ENST00000603917 1070 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.88□□□□□ -1.79
SSSCA1O60232 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.88□□□□□ -1.79
SSSCA1O60232 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.88□□□□□ -1.79
SSSCA1O60232 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.88□□□□□ -1.79
SSSCA1O60232 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.88□□□□□ -1.79
SSSCA1O60232 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 AL121950.1-201ENST00000624993 2077 ntBASIC3.88□□□□□ -1.79
SSSCA1O60232 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSSCA1O60232 AC000123.3-201ENST00000624029 4975 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.87□□□□□ -1.79
SSSCA1O60232 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 AL449283.1-201ENST00000602631 3403 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC120338.1-201ENST00000625074 1541 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.87□□□□□ -1.79
SSSCA1O60232 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SSSCA1O60232 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 RNA5SP510-201ENST00000364697 99 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 MIR921-201ENST00000401133 56 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 ARL4AP5-201ENST00000404372 599 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 PRPF38AP2-201ENST00000438179 851 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms