Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMAD6O43541 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SMAD6O43541 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC023141.6-201ENST00000429418 337 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.39□□□□□ -1.55
SMAD6O43541 HMGN1P5-201ENST00000448591 263 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.39□□□□□ -1.55
SMAD6O43541 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 RPS18P6-201ENST00000476880 458 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 BX284632.1-201ENST00000478218 541 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 AC093827.1-201ENST00000480094 861 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 AC016687.1-201ENST00000482574 353 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 IGBP1P4-201ENST00000503202 879 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 RPS4XP20-201ENST00000505751 772 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.39□□□□□ -1.55
SMAD6O43541 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 LRRC34P1-201ENST00000542742 915 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 HAUS8P1-201ENST00000549005 542 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.39□□□□□ -1.55
SMAD6O43541 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.39□□□□□ -1.55
SMAD6O43541 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.39□□□□□ -1.55
SMAD6O43541 OR51C1P-201ENST00000608504 942 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 MIR6133-201ENST00000617057 108 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 AC090527.3-201ENST00000619041 548 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 RLIMP2-201ENST00000427891 1563 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 AP005435.3-201ENST00000531260 3198 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.38□□□□□ -1.55
SMAD6O43541 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SMAD6O43541 RNA5SP296-201ENST00000410523 111 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC069282.1-201ENST00000411911 526 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SMAD6O43541 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC004854.1-201ENST00000440356 349 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 RPS11P7-201ENST00000442125 465 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 MED28P3-201ENST00000444288 531 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 AL591623.2-201ENST00000449978 222 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 AL389915.2-201ENST00000454576 441 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 ABCC13-202ENST00000463099 3842 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC108729.2-201ENST00000476543 840 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.38□□□□□ -1.55
SMAD6O43541 OR5M14P-201ENST00000506803 618 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 HMGN1P9-201ENST00000515212 298 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.38□□□□□ -1.55
SMAD6O43541 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC051619.2-201ENST00000559063 397 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 AC122134.1-201ENST00000565664 1104 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.38□□□□□ -1.55
SMAD6O43541 MIR3691-201ENST00000578066 90 ntBASIC5.38□□□□□ -1.55
SMAD6O43541 AC091057.3-201ENST00000602684 733 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms