Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL390058.1-201ENST00000603834 629 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL136363.1-201ENST00000605349 337 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL356274.1-201ENST00000617064 410 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009268.2-201ENST00000621925 457 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 KDM5DP1-201ENST00000622542 298 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL160413.1-201ENST00000622780 310 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 SPATA31C1-201ENST00000420021 3895 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC130360.2-201ENST00000533477 1556 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.08□□□□□ -1.28
PCDHGA11Q9Y5H2 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 DDX10P2-201ENST00000417796 2614 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 GNG5P1-201ENST00000255500 204 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 Y_RNA.326-201ENST00000365176 113 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 SNORD15A-201ENST00000384214 148 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SKP266-201ENST00000410232 287 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RNU2-8P-201ENST00000410727 190 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RPS6P23-201ENST00000413224 722 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RANP6-201ENST00000413691 644 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RBMY2KP-201ENST00000418221 992 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 COX6CP17-201ENST00000421389 185 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MED15P9-201ENST00000424716 533 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL672138.1-201ENST00000450604 1015 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 NIPA2P5-201ENST00000452282 464 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 TRGVB-201ENST00000453257 471 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MTND1P12-201ENST00000455231 147 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RPL23P10-201ENST00000468780 412 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC066616.1-201ENST00000486795 413 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC023194.1-201ENST00000493084 308 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 NIPA2P2-201ENST00000496376 1083 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC097263.1-201ENST00000496795 606 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 NIFKP7-201ENST00000503365 834 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC006499.2-201ENST00000513470 337 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 RN7SKP283-201ENST00000517197 270 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC007424.1-203ENST00000554613 687 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MIR5186-201ENST00000577504 120 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 VN1R80P-201ENST00000597126 338 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 OR7E94P-202ENST00000601375 790 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL391646.1-201ENST00000603860 190 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC093788.1-201ENST00000609356 927 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AP005329.3-201ENST00000609924 686 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL080312.2-201ENST00000613001 630 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC063952.1-203ENST00000634410 658 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 AC091544.5-201ENST00000620192 3815 ntBASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
PCDHGA11Q9Y5H2 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms