Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNA5SP101-201ENST00000517036 108 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 RN7SKP40-201ENST00000517211 242 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AP001804.3-201ENST00000525146 880 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC233290.2-201ENST00000552852 390 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 DPPA3P2-201ENST00000553589 478 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 MRPS21P9-201ENST00000571150 257 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC245052.7-201ENST00000601161 359 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 MIR7973-1-201ENST00000614683 76 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AC015712.7-201ENST00000615211 635 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL136967.1-201ENST00000625120 441 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 AL513523.1-201ENST00000417868 1309 ntBASIC7.22□□□□□ -1.25
USB1Q9BQ65 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
USB1Q9BQ65 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
USB1Q9BQ65 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
USB1Q9BQ65 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.21□□□□□ -1.25
USB1Q9BQ65 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.21□□□□□ -1.25
USB1Q9BQ65 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
USB1Q9BQ65 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.21□□□□□ -1.25
USB1Q9BQ65 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
USB1Q9BQ65 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 SNORA73A-201ENST00000364938 206 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RNU6-38P-201ENST00000384085 107 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 CNN3P1-201ENST00000401596 935 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RPSAP42-201ENST00000403415 878 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RPL31P52-201ENST00000407532 367 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 SNORD3J-201ENST00000408473 190 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 PRELID3BP11-201ENST00000414230 479 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC068137.1-201ENST00000429272 584 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 HSD3BP5-201ENST00000434856 1132 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 ASS1P5-201ENST00000435496 1239 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 RNU6-333P-201ENST00000459117 107 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC100843.1-201ENST00000475372 550 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC104563.1-201ENST00000476147 376 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RN7SL608P-201ENST00000492377 279 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RPL7AP2-201ENST00000496515 740 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC113208.1-201ENST00000497944 318 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 HSPD1P15-201ENST00000505573 1122 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 GAPDHP31-201ENST00000509325 1014 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 UBE2CP1-201ENST00000557130 554 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 MTCO3P23-201ENST00000561363 289 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AL356432.3-201ENST00000568952 465 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 TVP23CP2-201ENST00000571473 623 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 RN7SL785P-201ENST00000578437 253 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 MIR3942-201ENST00000585264 109 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC093063.1-201ENST00000599317 363 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AL022099.1-201ENST00000604551 712 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AL451054.3-201ENST00000611115 776 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AL162373.1-201ENST00000620433 407 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC073488.11-201ENST00000633298 754 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms