Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC090638.1-201ENST00000498296 909 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC108120.1-201ENST00000506543 991 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 NPM1P41-201ENST00000512920 831 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC009812.2-201ENST00000517657 457 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 DEFB131D-201ENST00000526803 184 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 OR1E3-201ENST00000575608 948 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC068020.1-201ENST00000594215 661 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC130352.1-201ENST00000602979 661 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 APOOP1-201ENST00000604695 592 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC008555.7-201ENST00000605008 583 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 AL008723.3-201ENST00000608926 449 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AC138627.2-201ENST00000624202 601 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 PARP1P1-201ENST00000413631 3026 ntBASIC8.04□□□□□ -1.12
LRCH3Q96II8 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
LRCH3Q96II8 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
LRCH3Q96II8 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 MTCO1P14-201ENST00000441695 1559 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 SNORD115.1-201ENST00000391109 76 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 H2AFZP3-201ENST00000394213 387 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 RNU2-8P-201ENST00000410727 190 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC092745.2-202ENST00000411880 369 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC009965.2-201ENST00000425328 970 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 RPL17P49-201ENST00000443728 411 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 CYCSP44-201ENST00000448560 313 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 MYL6P4-201ENST00000477911 453 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC009269.1-202ENST00000484381 469 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 RPL34P33-201ENST00000486062 334 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC025164.1-201ENST00000496249 478 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 RNU6-1308P-201ENST00000516817 103 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 SNORA48.10-201ENST00000516965 160 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 MIR4732-201ENST00000581873 76 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 MIR544B-201ENST00000582372 78 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC010327.2-201ENST00000587647 488 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC078938.1-201ENST00000620993 318 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC111152.1-202ENST00000635848 339 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms