Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 OR52A4P-201ENST00000472867 958 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC026826.1-201ENST00000493002 361 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 SNX18P24-201ENST00000505249 671 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MTND4LP22-201ENST00000508209 276 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC079395.1-201ENST00000510981 262 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MTCYBP43-201ENST00000513621 740 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 PANCR-202ENST00000513690 448 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 IGHV3-32-201ENST00000519182 355 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MRPS21P8-201ENST00000569196 235 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MIR3912-201ENST00000577566 105 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC015917.1-201ENST00000579654 510 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC009220.3-201ENST00000604318 586 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC098614.4-201ENST00000607601 462 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AL713922.2-201ENST00000619384 716 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC024940.5-201ENST00000622889 474 ntBASIC8.28□□□□□ -1.08
RC3H1Q5TC82 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
RC3H1Q5TC82 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.27□□□□□ -1.08
RC3H1Q5TC82 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.27□□□□□ -1.08
RC3H1Q5TC82 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
RC3H1Q5TC82 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC027575.3-201ENST00000583058 2747 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 NEPNP-201ENST00000404786 1371 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL354854.1-201ENST00000455940 1363 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC122713.2-201ENST00000624942 3335 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC104581.5-201ENST00000624171 7141 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL356776.1-201ENST00000406574 447 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 RN7SKP229-201ENST00000410465 302 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 RPS26P38-201ENST00000414476 348 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 MTCO2P12-201ENST00000427426 682 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL512649.1-201ENST00000428997 581 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL121776.1-201ENST00000429337 372 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 RPL23AP19-201ENST00000436229 369 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 Z80107.2-201ENST00000445127 392 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 ST13P14-201ENST00000474095 734 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 PPIAP19-201ENST00000486414 492 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC109445.1-201ENST00000512356 383 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC060775.1-201ENST00000518241 520 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC008147.3-201ENST00000548666 354 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 TPRX1P1-201ENST00000557620 319 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC116312.1-201ENST00000606841 314 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC109309.2-201ENST00000612597 332 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AP001264.1-201ENST00000620602 703 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC018816.2-201ENST00000621460 353 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL359694.2-201ENST00000567753 1615 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AL359922.2-201ENST00000581788 3017 ntBASIC8.27□□□□□ -1.09
RC3H1Q5TC82 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.27□□□□□ -1.09
RC3H1Q5TC82 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms