Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 SNRPEP6-201ENST00000407465 277 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 RPS26P38-201ENST00000414476 348 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 RPL35AP3-201ENST00000414680 288 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 TRGV6-201ENST00000417928 299 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AL009174.1-201ENST00000426577 416 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 RPL21P110-201ENST00000433345 446 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.43□□□□□ -1.54
SUMO3P55854 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 TRBV5-2-201ENST00000489095 273 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AP000563.1-201ENST00000490865 758 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC008629.2-201ENST00000503783 483 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC010285.3-201ENST00000511668 676 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 RN7SKP253-201ENST00000516424 309 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.43□□□□□ -1.54
SUMO3P55854 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC018552.1-201ENST00000562099 811 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC090751.1-201ENST00000566966 267 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.43□□□□□ -1.54
SUMO3P55854 AC006115.2-201ENST00000596823 202 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 ATE1-AS1-202ENST00000636460 506 ntBASIC5.43□□□□□ -1.54
SUMO3P55854 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.43□□□□□ -1.54
SUMO3P55854 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.43□□□□□ -1.54
SUMO3P55854 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SUMO3P55854 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SUMO3P55854 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 AC106872.5-201ENST00000508856 1416 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AC130304.1-201ENST00000622942 2385 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 CASC19-206ENST00000641028 1430 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SUMO3P55854 snoZ40.1-201ENST00000364540 72 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 OR1L1-202ENST00000373686 1083 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL451142.1-201ENST00000375867 775 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 AL590084.1-201ENST00000407885 387 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RNU6-575P-201ENST00000411326 105 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC073069.1-201ENST00000428657 441 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AC069154.1-201ENST00000432914 542 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 TPTE2P6-202ENST00000445572 1007 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 RPL23AP71-201ENST00000470966 469 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 PFN1P6-201ENST00000476786 399 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RN7SL170P-201ENST00000487098 295 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 SNORA3.4-201ENST00000515969 96 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RN7SKP288-201ENST00000516227 268 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RNA5SP473-201ENST00000516402 125 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RNU5A-4P-201ENST00000516588 111 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RN7SKP70-201ENST00000516655 271 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 OR4A2P-201ENST00000527276 913 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms