Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.64□□□□□ -1.35
MRE11P49959 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 AC022404.1-201ENST00000555320 273 ntBASIC6.64□□□□□ -1.35
MRE11P49959 NMNAT1P5-201ENST00000559657 841 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AGGF1P9-201ENST00000561884 913 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC092332.1-201ENST00000563684 829 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.64□□□□□ -1.35
MRE11P49959 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 AL160237.3-201ENST00000604114 1013 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AL022161.1-201ENST00000604390 213 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 Mico1.1-201ENST00000611698 204 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.64□□□□□ -1.35
MRE11P49959 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
MRE11P49959 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.63□□□□□ -1.35
MRE11P49959 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 RN7SKP108-201ENST00000411367 328 ntBASIC6.63□□□□□ -1.35
MRE11P49959 TCP1P3-201ENST00000414406 1498 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC013268.2-201ENST00000420753 337 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AL606495.1-201ENST00000422100 813 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC241520.1-201ENST00000422654 1099 ntBASIC6.63□□□□□ -1.35
MRE11P49959 NANOGP5-201ENST00000424456 877 ntBASIC6.63□□□□□ -1.35
MRE11P49959 NDUFB4P8-201ENST00000435351 367 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC006994.1-201ENST00000438212 839 ntBASIC6.63□□□□□ -1.35
MRE11P49959 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.63□□□□□ -1.35
MRE11P49959 AC018717.1-201ENST00000457712 1505 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.63□□□□□ -1.35
MRE11P49959 RPS17P5-201ENST00000498293 408 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC018645.1-201ENST00000505003 109 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.63□□□□□ -1.35
MRE11P49959 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.63□□□□□ -1.35
MRE11P49959 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.63□□□□□ -1.35
MRE11P49959 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
MRE11P49959 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.63□□□□□ -1.35
MRE11P49959 AC125611.1-201ENST00000549563 229 ntBASIC6.63□□□□□ -1.35
MRE11P49959 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.63□□□□□ -1.35
MRE11P49959 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 VN1R81P-201ENST00000602085 372 ntBASIC6.63□□□□□ -1.35
MRE11P49959 MIR1264-201ENST00000616374 69 ntBASIC6.63□□□□□ -1.35
MRE11P49959 AC078880.5-201ENST00000617845 421 ntBASIC6.63□□□□□ -1.35
MRE11P49959 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.63□□□□□ -1.35
MRE11P49959 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 OR5AC4P-202ENST00000642086 985 ntBASIC6.63□□□□□ -1.35
MRE11P49959 SAMMSON-227ENST00000642114 1199 ntBASIC6.63□□□□□ -1.35
MRE11P49959 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
MRE11P49959 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.63□□□□□ -1.35
MRE11P49959 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MRE11P49959 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 DDX18P6-201ENST00000450119 1997 ntBASIC6.62□□□□□ -1.35
MRE11P49959 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
MRE11P49959 MIR130B-202ENST00000385018 82 ntBASIC6.62□□□□□ -1.35
MRE11P49959 RAB28P1-201ENST00000411517 641 ntBASIC6.62□□□□□ -1.35
MRE11P49959 CTSL3P-202ENST00000412179 788 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 PTP4A1P7-201ENST00000423476 514 ntBASIC6.62□□□□□ -1.35
MRE11P49959 RPS6P15-201ENST00000431996 751 ntBASIC6.62□□□□□ -1.35
MRE11P49959 PTP4A1P3-201ENST00000433661 420 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC012512.1-201ENST00000446594 718 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms