Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TTC41P-205ENST00000551270 3963 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HMGA1P17096 RN7SKP106-201ENST00000410832 272 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC016397.1-201ENST00000412463 242 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 RPS17P8-201ENST00000434525 335 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC016831.4-201ENST00000438302 307 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGA1P17096 AL049874.2-201ENST00000492636 288 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC073073.1-201ENST00000493920 463 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC073358.1-201ENST00000505671 684 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC091868.1-201ENST00000508746 304 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGA1P17096 RNU2-30P-201ENST00000516209 141 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGA1P17096 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGA1P17096 AGGF1P9-201ENST00000561884 913 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 SNORA74C-1-201ENST00000580726 201 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGA1P17096 MIR378J-201ENST00000611988 109 ntBASIC5.03□□□□□ -1.6
HMGA1P17096 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGA1P17096 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGA1P17096 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGA1P17096 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGA1P17096 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 OR9K1P-202ENST00000641111 3217 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HMGA1P17096 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGA1P17096 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HMGA1P17096 AC007382.1-201ENST00000624376 2618 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGA1P17096 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGA1P17096 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
HMGA1P17096 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.02□□□□□ -1.61
HMGA1P17096 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGA1P17096 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HMGA1P17096 RPS3AP23-201ENST00000401762 784 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGA1P17096 RAB9BP1-201ENST00000519581 626 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 RPL23AP53-201ENST00000521854 457 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 AC093249.4-201ENST00000564755 259 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.02□□□□□ -1.61
HMGA1P17096 AC073091.2-201ENST00000603205 907 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 DHX40P1-201ENST00000588725 1412 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 AC009643.2-201ENST00000603543 1448 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 AL442639.1-201ENST00000625030 1899 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 AC109446.4-201ENST00000623235 2755 ntBASIC5.02□□□□□ -1.61
HMGA1P17096 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGA1P17096 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.02□□□□□ -1.61
HMGA1P17096 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGA1P17096 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGA1P17096 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HMGA1P17096 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.01□□□□□ -1.61
HMGA1P17096 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 GVINP1-202ENST00000531871 7271 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AC126755.2-208ENST00000327792 462 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AC138969.1-213ENST00000331436 462 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AC068287.1-201ENST00000430283 295 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGA1P17096 AC090602.1-201ENST00000469695 252 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.01□□□□□ -1.61
HMGA1P17096 MYL12BP2-201ENST00000503948 512 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AC111000.3-201ENST00000508057 576 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGA1P17096 RNU6-709P-201ENST00000517257 104 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 C1GALT1P3-201ENST00000522049 819 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGA1P17096 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGA1P17096 AC105129.1-201ENST00000560250 297 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 MIR5096-201ENST00000583713 70 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.01□□□□□ -1.61
HMGA1P17096 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.01□□□□□ -1.61
HMGA1P17096 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.01□□□□□ -1.61
HMGA1P17096 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HMGA1P17096 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HMGA1P17096 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms