Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC012075.1-201ENST00000436549 580 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.12□□□□□ -1.75
CTSDP07339 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.12□□□□□ -1.75
CTSDP07339 AL391987.1-201ENST00000441025 200 ntBASIC4.12□□□□□ -1.75
CTSDP07339 RPL7L1P1-201ENST00000448259 785 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.12□□□□□ -1.75
CTSDP07339 RANP1-206ENST00000455094 651 ntBASIC4.12□□□□□ -1.75
CTSDP07339 Z92846.1-201ENST00000456203 268 ntBASIC4.12□□□□□ -1.75
CTSDP07339 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.12□□□□□ -1.75
CTSDP07339 AC100832.1-201ENST00000471945 383 ntBASIC4.12□□□□□ -1.75
CTSDP07339 RN7SL174P-201ENST00000475578 289 ntBASIC4.12□□□□□ -1.75
CTSDP07339 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 AL136038.1-201ENST00000497246 351 ntBASIC4.12□□□□□ -1.75
CTSDP07339 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
CTSDP07339 RPEP1-201ENST00000504507 658 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.12□□□□□ -1.75
CTSDP07339 Y_RNA.719-201ENST00000517156 106 ntBASIC4.12□□□□□ -1.75
CTSDP07339 IGKV3D-34-201ENST00000522638 302 ntBASIC4.12□□□□□ -1.75
CTSDP07339 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.12□□□□□ -1.75
CTSDP07339 AC012339.2-201ENST00000523996 453 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC022882.1-201ENST00000532142 501 ntBASIC4.12□□□□□ -1.75
CTSDP07339 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.12□□□□□ -1.75
CTSDP07339 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.12□□□□□ -1.75
CTSDP07339 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.12□□□□□ -1.75
CTSDP07339 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.12□□□□□ -1.75
CTSDP07339 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 AC233280.2-201ENST00000603917 1070 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AL589674.2-201ENST00000604304 337 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AL353600.1-201ENST00000608148 251 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC234782.5-201ENST00000617723 324 ntBASIC4.12□□□□□ -1.75
CTSDP07339 MIR8080-201ENST00000622224 89 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 AL596275.2-204ENST00000641628 552 ntBASIC4.12□□□□□ -1.75
CTSDP07339 AL596275.2-206ENST00000641957 626 ntBASIC4.12□□□□□ -1.75
CTSDP07339 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.12□□□□□ -1.75
CTSDP07339 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 AC235565.1-201ENST00000456962 1325 ntBASIC4.12□□□□□ -1.75
CTSDP07339 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.12□□□□□ -1.75
CTSDP07339 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTSDP07339 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CTSDP07339 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CTSDP07339 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
CTSDP07339 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 MIR600-201ENST00000385007 98 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AC233289.1-201ENST00000403700 508 ntBASIC4.11□□□□□ -1.75
CTSDP07339 TRGV5P-201ENST00000419915 354 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AL133325.1-201ENST00000421090 382 ntBASIC4.11□□□□□ -1.75
CTSDP07339 FAM96AP1-201ENST00000430879 482 ntBASIC4.11□□□□□ -1.75
CTSDP07339 BX323845.1-201ENST00000432417 179 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.11□□□□□ -1.75
CTSDP07339 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.11□□□□□ -1.75
CTSDP07339 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 RPL7P45-201ENST00000455851 743 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AC022795.1-201ENST00000473808 480 ntBASIC4.11□□□□□ -1.75
CTSDP07339 NIP7P2-201ENST00000485801 544 ntBASIC4.11□□□□□ -1.75
CTSDP07339 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AC079075.1-201ENST00000559543 878 ntBASIC4.11□□□□□ -1.75
CTSDP07339 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 RN7SL52P-201ENST00000584271 284 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.11□□□□□ -1.75
CTSDP07339 AL049794.2-201ENST00000616301 365 ntBASIC4.11□□□□□ -1.75
CTSDP07339 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.11□□□□□ -1.75
CTSDP07339 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 CYP4F35P-202ENST00000636121 390 ntBASIC4.11□□□□□ -1.75
CTSDP07339 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CTSDP07339 LINC01109-201ENST00000603837 3081 ntBASIC4.11□□□□□ -1.75
CTSDP07339 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTSDP07339 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CTSDP07339 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.11□□□□□ -1.75
CTSDP07339 MAPK10-303ENST00000641324 3959 ntBASIC4.11□□□□□ -1.75
CTSDP07339 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.11□□□□□ -1.75
CTSDP07339 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.1□□□□□ -1.75
CTSDP07339 AL672167.1-205ENST00000641112 3080 ntBASIC4.1□□□□□ -1.75
CTSDP07339 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.1□□□□□ -1.75
CTSDP07339 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTSDP07339 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTSDP07339 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms