Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 NPM1P22-201ENST00000427761 952 ntBASIC4.86□□□□□ -1.63
HCN1O60741 GAPDHP58-201ENST00000438477 1006 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 AL589765.3-201ENST00000446084 462 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.86□□□□□ -1.63
HCN1O60741 AURKAPS1-201ENST00000451805 1212 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AL389915.2-201ENST00000454576 441 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC093827.1-201ENST00000480094 861 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC008410.1-201ENST00000483777 339 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AL133372.1-201ENST00000493565 745 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 AP000926.3-201ENST00000497201 299 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 SNRPCP2-201ENST00000504370 475 ntBASIC4.86□□□□□ -1.63
HCN1O60741 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.86□□□□□ -1.63
HCN1O60741 AC147055.3-201ENST00000510547 851 ntBASIC4.86□□□□□ -1.63
HCN1O60741 RNU6-941P-201ENST00000516346 108 ntBASIC4.86□□□□□ -1.63
HCN1O60741 SNORD116-30-201ENST00000516468 85 ntBASIC4.86□□□□□ -1.63
HCN1O60741 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.86□□□□□ -1.63
HCN1O60741 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HCN1O60741 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.86□□□□□ -1.63
HCN1O60741 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.86□□□□□ -1.63
HCN1O60741 AL390726.5-202ENST00000564800 256 ntBASIC4.86□□□□□ -1.63
HCN1O60741 RPL10P14-201ENST00000565265 298 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.86□□□□□ -1.63
HCN1O60741 RN7SL435P-201ENST00000584418 282 ntBASIC4.86□□□□□ -1.63
HCN1O60741 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 AC095055.1-201ENST00000603472 1113 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AL713998.2-201ENST00000604538 1198 ntBASIC4.86□□□□□ -1.63
HCN1O60741 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HCN1O60741 AC090527.3-201ENST00000619041 548 ntBASIC4.86□□□□□ -1.63
HCN1O60741 MIR6839-201ENST00000620425 113 ntBASIC4.86□□□□□ -1.63
HCN1O60741 AP002505.2-201ENST00000623585 696 ntBASIC4.86□□□□□ -1.63
HCN1O60741 TMEM30CP-203ENST00000637814 1035 ntBASIC4.86□□□□□ -1.63
HCN1O60741 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HCN1O60741 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HCN1O60741 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.86□□□□□ -1.63
HCN1O60741 AC011493.1-201ENST00000596753 1632 ntBASIC4.86□□□□□ -1.63
HCN1O60741 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.86□□□□□ -1.63
HCN1O60741 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HCN1O60741 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.86□□□□□ -1.63
HCN1O60741 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 MIR765-201ENST00000390226 114 ntBASIC4.85□□□□□ -1.63
HCN1O60741 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HCN1O60741 HSPA8P15-201ENST00000401676 786 ntBASIC4.85□□□□□ -1.63
HCN1O60741 AL359643.1-201ENST00000404109 423 ntBASIC4.85□□□□□ -1.63
HCN1O60741 SEPT7P8-201ENST00000413308 775 ntBASIC4.85□□□□□ -1.63
HCN1O60741 AC104333.2-201ENST00000422630 192 ntBASIC4.85□□□□□ -1.63
HCN1O60741 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 PTMAP6-201ENST00000439110 327 ntBASIC4.85□□□□□ -1.63
HCN1O60741 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.85□□□□□ -1.63
HCN1O60741 OR52Y1P-201ENST00000452418 828 ntBASIC4.85□□□□□ -1.63
HCN1O60741 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 RN7SL329P-201ENST00000467740 299 ntBASIC4.85□□□□□ -1.63
HCN1O60741 RPS4XP20-201ENST00000505751 772 ntBASIC4.85□□□□□ -1.63
HCN1O60741 RFPL4AP5-201ENST00000514977 504 ntBASIC4.85□□□□□ -1.63
HCN1O60741 RNU4-18P-201ENST00000516751 149 ntBASIC4.85□□□□□ -1.63
HCN1O60741 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.85□□□□□ -1.63
HCN1O60741 YWHABP2-201ENST00000540201 713 ntBASIC4.85□□□□□ -1.63
HCN1O60741 SETP1-201ENST00000556014 845 ntBASIC4.85□□□□□ -1.63
HCN1O60741 AL137072.1-201ENST00000603444 466 ntBASIC4.85□□□□□ -1.63
HCN1O60741 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.85□□□□□ -1.63
HCN1O60741 AC009163.6-201ENST00000612367 342 ntBASIC4.85□□□□□ -1.63
HCN1O60741 MIR6730-201ENST00000622213 67 ntBASIC4.85□□□□□ -1.63
HCN1O60741 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 RBPJP2-201ENST00000618187 1444 ntBASIC4.85□□□□□ -1.63
HCN1O60741 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.85□□□□□ -1.63
HCN1O60741 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.85□□□□□ -1.63
HCN1O60741 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 AC004817.4-201ENST00000602396 3625 ntBASIC4.85□□□□□ -1.63
HCN1O60741 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HCN1O60741 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HCN1O60741 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HCN1O60741 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HCN1O60741 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HCN1O60741 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms