Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX1O00570 COPS8P2-201ENST00000473228 627 ntBASIC6.93□□□□□ -1.3
SOX1O00570 UBTFL6-201ENST00000477929 1024 ntBASIC6.93□□□□□ -1.3
SOX1O00570 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.93□□□□□ -1.3
SOX1O00570 AC046134.1-201ENST00000514454 666 ntBASIC6.93□□□□□ -1.3
SOX1O00570 RNA5SP92-201ENST00000516437 110 ntBASIC6.93□□□□□ -1.3
SOX1O00570 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.93□□□□□ -1.3
SOX1O00570 AL121839.1-201ENST00000556233 1185 ntBASIC6.93□□□□□ -1.3
SOX1O00570 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 ZNF322P1-201ENST00000568013 1209 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 MIR4528-201ENST00000577763 90 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 RPL23AP61-201ENST00000623642 466 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC018692.2-201ENST00000624130 348 ntBASIC6.93□□□□□ -1.3
SOX1O00570 AC116667.2-201ENST00000641075 823 ntBASIC6.93□□□□□ -1.3
SOX1O00570 LINC01739-205ENST00000641890 573 ntBASIC6.93□□□□□ -1.3
SOX1O00570 SAMMSON-227ENST00000642114 1199 ntBASIC6.93□□□□□ -1.3
SOX1O00570 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 RPS4XP5-202ENST00000449995 1334 ntBASIC6.93□□□□□ -1.3
SOX1O00570 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SOX1O00570 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.93□□□□□ -1.3
SOX1O00570 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SOX1O00570 AL354685.2-201ENST00000448218 1447 ntBASIC6.93□□□□□ -1.3
SOX1O00570 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.93□□□□□ -1.3
SOX1O00570 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 TEX21P-201ENST00000447107 1476 ntBASIC6.92□□□□□ -1.3
SOX1O00570 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 AC073342.2-201ENST00000595842 1800 ntBASIC6.92□□□□□ -1.3
SOX1O00570 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SOX1O00570 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 THAP12P7-201ENST00000520248 2290 ntBASIC6.92□□□□□ -1.3
SOX1O00570 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 METTL21EP-201ENST00000298105 713 ntBASIC6.92□□□□□ -1.3
SOX1O00570 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SOX1O00570 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AL645927.1-201ENST00000396783 406 ntBASIC6.92□□□□□ -1.3
SOX1O00570 FGF7P8-201ENST00000402994 292 ntBASIC6.92□□□□□ -1.3
SOX1O00570 HMGB3P18-201ENST00000406327 590 ntBASIC6.92□□□□□ -1.3
SOX1O00570 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 OR8F1P-201ENST00000425243 930 ntBASIC6.92□□□□□ -1.3
SOX1O00570 GAPDHP51-201ENST00000426454 1000 ntBASIC6.92□□□□□ -1.3
SOX1O00570 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AL662791.1-201ENST00000441992 928 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 HMGB1P16-201ENST00000447155 540 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AC005002.1-201ENST00000447458 540 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AL118496.2-201ENST00000448300 230 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 MTND1P16-201ENST00000465177 898 ntBASIC6.92□□□□□ -1.3
SOX1O00570 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 FAM92A1P2-202ENST00000504766 877 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.92□□□□□ -1.3
SOX1O00570 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.92□□□□□ -1.3
SOX1O00570 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 AP000860.1-201ENST00000605250 559 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 AP004607.9-201ENST00000618202 316 ntBASIC6.92□□□□□ -1.3
SOX1O00570 MIR6085-201ENST00000618314 110 ntBASIC6.92□□□□□ -1.3
SOX1O00570 AC009704.2-201ENST00000618739 483 ntBASIC6.92□□□□□ -1.3
SOX1O00570 CR381653.2-201ENST00000624041 768 ntBASIC6.92□□□□□ -1.3
SOX1O00570 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
SOX1O00570 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.92□□□□□ -1.3
SOX1O00570 Z99129.4-201ENST00000624649 2435 ntBASIC6.92□□□□□ -1.3
SOX1O00570 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
SOX1O00570 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms