Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX39AO00148 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DDX39AO00148 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.71□□□□□ -1.5
DDX39AO00148 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DDX39AO00148 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DDX39AO00148 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.71□□□□□ -1.5
DDX39AO00148 INTS6P1-201ENST00000504674 2530 ntBASIC5.71□□□□□ -1.5
DDX39AO00148 AC097461.1-201ENST00000568928 2821 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 CASC19-221ENST00000641309 1382 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
DDX39AO00148 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC002524.1-201ENST00000411687 547 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 HSPD1P12-201ENST00000429127 1069 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 VN1R54P-201ENST00000435210 1049 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 KNOP1P3-201ENST00000446933 426 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 BX842559.2-201ENST00000451418 605 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC147055.1-201ENST00000509261 750 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 AP001922.4-201ENST00000526967 290 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX39AO00148 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC022884.2-201ENST00000578535 580 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 EIF1P5-201ENST00000585002 234 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 AP001542.1-201ENST00000591314 200 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.7□□□□□ -1.5
DDX39AO00148 AC087783.2-201ENST00000605070 562 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.7□□□□□ -1.5
DDX39AO00148 AL592494.3-201ENST00000609485 464 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 AC004241.3-201ENST00000611728 517 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 AC026367.3-201ENST00000619032 590 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.7□□□□□ -1.5
DDX39AO00148 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
DDX39AO00148 AL356317.1-201ENST00000396110 1436 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 AC073429.2-201ENST00000569694 1444 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX39AO00148 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
DDX39AO00148 AP001029.2-203ENST00000589795 4910 ntBASIC5.7□□□□□ -1.5
DDX39AO00148 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DDX39AO00148 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX39AO00148 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DDX39AO00148 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
DDX39AO00148 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX39AO00148 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX39AO00148 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX39AO00148 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.69□□□□□ -1.5
DDX39AO00148 RN7SKP103-201ENST00000363848 320 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 SNORA70.10-201ENST00000384515 134 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 HMGB3P7-201ENST00000400214 611 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 CHEK2P3-201ENST00000416118 248 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 OR2AM1P-201ENST00000422137 422 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 AC104837.2-201ENST00000427236 424 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX39AO00148 AL137845.2-201ENST00000444292 988 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 HIGD1AP8-201ENST00000453927 274 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 C1DP3-201ENST00000455013 423 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 AC140172.1-201ENST00000502928 141 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX39AO00148 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX39AO00148 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX39AO00148 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX39AO00148 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX39AO00148 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 FAM106CP-201ENST00000582212 507 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 AC119501.1-201ENST00000603646 475 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX39AO00148 AC007996.1-201ENST00000620414 2821 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX39AO00148 AC053481.2-202ENST00000582394 1500 ntBASIC5.69□□□□□ -1.5
DDX39AO00148 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms