Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 snoU109.5-201ENST00000516231 132 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 RNU6-1308P-201ENST00000516817 103 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC010306.1-201ENST00000523223 1117 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 RNU4ATAC-201ENST00000580972 127 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC015688.2-201ENST00000584523 262 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC008555.7-201ENST00000605008 583 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AL645933.2-201ENST00000606743 1207 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC141002.1-201ENST00000607025 279 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AC013468.1-201ENST00000608680 598 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AL392048.1-201ENST00000613946 534 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AP004607.9-201ENST00000618202 316 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 AL603755.1-201ENST00000619504 163 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 YES1P1-201ENST00000418510 1628 ntBASIC6.43□□□□□ -1.38
CCDC66A2RUB6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC66A2RUB6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC021755.1-201ENST00000559747 1447 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AL158152.1-201ENST00000602652 1435 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AL161756.3-201ENST00000641216 2071 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 RNA5SP27-201ENST00000363839 119 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 MIR142-201ENST00000384835 87 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 RPL23AP59-201ENST00000399415 461 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 SNORA77.2-201ENST00000408571 112 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 FO393419.3-201ENST00000428741 282 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC093716.1-201ENST00000435923 377 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 GSTA7P-201ENST00000438425 448 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 THAP5P1-201ENST00000439089 262 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 TCEA1P3-201ENST00000443005 880 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 COX4I1P2-201ENST00000447446 547 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 RPL5P22-201ENST00000480199 884 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 TRBV5-2-201ENST00000489095 273 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 HPRT1P2-201ENST00000505250 544 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC090958.1-201ENST00000511122 351 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 OR5BM1P-201ENST00000512021 366 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC138517.1-201ENST00000515724 568 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 Y_RNA.655-201ENST00000515919 96 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 Y_RNA.710-201ENST00000516975 110 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 HMGB1P1-201ENST00000522557 636 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC135983.3-201ENST00000528049 1226 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 DPRXP4-201ENST00000578053 568 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 MIR4472-2-201ENST00000582069 67 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 NBR2-204ENST00000587322 63 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP001269.3-201ENST00000588718 329 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC068726.1-201ENST00000610993 341 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC090116.1-201ENST00000615679 446 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 MIR6811-201ENST00000620409 58 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AP001962.1-201ENST00000624114 559 ntBASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC66A2RUB6 AC024023.1-201ENST00000624530 922 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms