Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC106806.2-201ENST00000509365 500 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNU6-941P-201ENST00000516346 108 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR4R2P-201ENST00000530815 597 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 DUX4L52-201ENST00000549363 777 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AGGF1P9-201ENST00000561884 913 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL158062.1-201ENST00000619632 745 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SMG1P4-204ENST00000523028 4131 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR55B1P-203ENST00000641518 2602 ntBASIC4.71□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC009501.3-201ENST00000605001 1352 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNA5SP284-201ENST00000384547 118 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNA5SP339-201ENST00000390987 122 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL356057.1-202ENST00000402263 756 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC007000.2-201ENST00000442564 487 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC091180.1-201ENST00000462104 372 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC007998.1-201ENST00000474156 672 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 EIF1P7-201ENST00000487533 337 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 HMGB1P3-201ENST00000502802 616 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC034244.2-201ENST00000514668 858 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC022826.1-201ENST00000519383 805 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR8A2P-201ENST00000528631 952 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CR383656.14-201ENST00000551951 406 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC107958.1-201ENST00000556576 290 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 FO393422.1-201ENST00000603908 708 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL450270.1-201ENST00000606160 391 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AP006248.3-201ENST00000623580 594 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 STX3-208ENST00000641815 3236 ntBASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRBV4-1A0A0J9YWV2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC107021.2-201ENST00000567714 2095 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CASC19-221ENST00000641309 1382 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNU1-77P-201ENST00000390868 162 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 RNU1-149P-201ENST00000390870 161 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 GSTA12P-201ENST00000402398 508 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 BTF3P9-201ENST00000418784 283 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 IPPKP1-201ENST00000422501 768 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 EI24P4-201ENST00000423683 1078 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 COX6CP13-201ENST00000428703 226 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 MTND2P21-201ENST00000436242 1042 ntBASIC4.69□□□□□ -1.66
TRBV4-1A0A0J9YWV2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms