Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC116158.1-201ENST00000560231 2129 ntBASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRAV27A0A087WT01 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AL359922.3-201ENST00000624779 1670 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AL359643.1-201ENST00000404109 423 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AP000580.1-201ENST00000404439 358 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 RN7SKP206-201ENST00000410823 293 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC079355.1-201ENST00000421770 223 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 NMNAT1P2-201ENST00000435192 860 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC004938.1-201ENST00000438468 308 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 CYCSP34-201ENST00000458172 304 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 MRPS33P2-201ENST00000507850 322 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC004980.4-201ENST00000513375 203 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 RN7SKP46-201ENST00000515942 234 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 RNA5SP392-201ENST00000516905 112 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC093799.2-201ENST00000610062 578 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC093849.1-201ENST00000563631 2209 ntBASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRAV27A0A087WT01 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 Z97832.1-201ENST00000402490 328 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 RNA5SP345-201ENST00000410646 108 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 GJA6P-201ENST00000415117 1042 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 FABP7P2-201ENST00000429946 379 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 OTX2P1-201ENST00000450956 354 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC108751.2-201ENST00000469993 231 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 RN7SL558P-201ENST00000497468 299 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 SUMO2P4-201ENST00000504193 276 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC007225.2-201ENST00000562529 256 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 MIR3691-201ENST00000578066 90 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 MIR4489-201ENST00000578869 62 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC010424.2-201ENST00000607594 443 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 MIR6768-201ENST00000610734 72 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 MIR4302-201ENST00000638058 60 ntBASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRAV27A0A087WT01 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AL445487.1-201ENST00000415694 1580 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 OR56A4-201ENST00000330728 1209 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 RNA5SP435-201ENST00000364044 108 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 RNU1-106P-201ENST00000384382 164 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms