Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 RPS26P13-201ENST00000419030 330 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 MGAT2P2-201ENST00000427194 797 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC234781.3-201ENST00000452540 973 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 RPL7P16-201ENST00000479738 738 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 RN7SL558P-201ENST00000497468 299 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 RNU6-709P-201ENST00000517257 104 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 SAMMSON-226ENST00000642089 1582 ntBASIC5.19□□□□□ -1.58
CISHQ9NSE2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CISHQ9NSE2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.19□□□□□ -1.58
CISHQ9NSE2 AC007342.5-201ENST00000571340 2142 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 SNORA58B-201ENST00000364259 136 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 NPM1P37-201ENST00000403105 874 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 NPM1P38-201ENST00000403835 865 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 PA2G4P6-201ENST00000438325 1197 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 RPL12P3-201ENST00000440080 396 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 GTF3AP5-201ENST00000442645 697 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 RPL31P44-201ENST00000447680 377 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 OR52J1P-201ENST00000450596 932 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 HIGD1AP8-201ENST00000453927 274 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 RN7SL826P-201ENST00000479724 288 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 AP001922.4-201ENST00000526967 290 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 AC009117.1-201ENST00000563948 554 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 CYCSP40-201ENST00000575927 294 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 AL121932.1-201ENST00000605542 214 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 AC015914.2-201ENST00000618167 288 ntBASIC5.18□□□□□ -1.58
CISHQ9NSE2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CISHQ9NSE2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.18□□□□□ -1.58
CISHQ9NSE2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 TMBIM7P-201ENST00000418074 855 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 BRWD1P3-201ENST00000428816 390 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 RPS17P8-201ENST00000434525 335 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AURKAPS2-201ENST00000454983 333 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC008410.1-201ENST00000483777 339 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 NPM1P28-201ENST00000492269 840 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 RNA5SP249-201ENST00000516127 99 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 EDDM3DP-201ENST00000554692 434 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 BGLT3-201ENST00000564523 994 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AC012414.7-202ENST00000622705 1090 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 DDX18P5-201ENST00000534547 1306 ntBASIC5.17□□□□□ -1.58
CISHQ9NSE2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.17□□□□□ -1.58
CISHQ9NSE2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CISHQ9NSE2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.16□□□□□ -1.58
CISHQ9NSE2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CISHQ9NSE2 SMG1P4-204ENST00000523028 4131 ntBASIC5.16□□□□□ -1.58
CISHQ9NSE2 SMG1P6-201ENST00000532337 2930 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms