Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 CASP3P1-201ENST00000446037 609 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC016027.4-201ENST00000450866 277 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 OTX2P1-201ENST00000450956 354 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC079080.1-201ENST00000479841 822 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 MTND2P14-201ENST00000482139 351 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 NPM1P21-201ENST00000513394 762 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 OR5AM1P-201ENST00000532136 1032 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 NPIPB14P-203ENST00000532298 987 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL356057.1-201ENST00000533798 831 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 GARSP1-201ENST00000570895 719 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AP005136.2-201ENST00000583253 1049 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC008521.2-201ENST00000591021 259 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL358072.1-201ENST00000604156 575 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC019131.2-201ENST00000609071 870 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL139407.1-201ENST00000613826 1175 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC009318.3-201ENST00000616916 503 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC017007.4-201ENST00000503353 1352 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RNA5SP211-201ENST00000365516 117 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 SNORD65C-201ENST00000390962 71 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL034403.1-201ENST00000399414 885 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MTCO1P56-201ENST00000401674 224 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RPS7P9-201ENST00000414704 586 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL008987.1-201ENST00000415528 237 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RPS7P8-201ENST00000418311 581 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 GTF2IP2-201ENST00000424290 697 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RPL12P12-201ENST00000424633 501 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 BRWD1P3-201ENST00000428816 390 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 NANOGP2-201ENST00000435391 727 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC110602.1-201ENST00000437414 318 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PA2G4P6-201ENST00000438325 1197 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 DNAJA1P5-201ENST00000440278 943 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AL391987.1-201ENST00000441025 200 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PTENP1-201ENST00000447117 1215 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 MTND1P29-201ENST00000448112 647 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 HMGB1P7-201ENST00000450921 612 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 ART2BP-201ENST00000453501 499 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC244505.3-201ENST00000454598 187 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 ATG12P2-201ENST00000456830 416 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC104164.1-201ENST00000460282 590 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC090602.1-201ENST00000469695 252 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 PFN1P6-201ENST00000476786 399 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 AC006539.1-201ENST00000481419 501 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 RPL38P3-201ENST00000484463 213 ntBASIC5.49□□□□□ -1.53
AMBRA1Q9C0C7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms