Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 AC127024.6-201ENST00000621598 424 ntBASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 AC095031.1-201ENST00000623685 672 ntBASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 AC005618.1-201ENST00000606901 3148 ntBASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SYNGAP1Q96PV0 CR848007.1-201ENST00000442354 1699 ntBASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 AL078595.2-201ENST00000605309 1780 ntBASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.15□□□□□ -1.27
SYNGAP1Q96PV0 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 SNORA21-201ENST00000362423 132 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 RNA5SP514-201ENST00000363717 111 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 SNORD65-201ENST00000391079 73 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 VDAC2P1-201ENST00000399358 958 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 RNU4-74P-201ENST00000411280 161 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AK4P4-201ENST00000419465 646 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 NPM1P22-201ENST00000427761 952 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 MTND3P1-201ENST00000441336 220 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC002553.3-201ENST00000453002 341 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC092824.1-201ENST00000483524 576 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC091965.3-201ENST00000506236 208 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC006499.4-201ENST00000510947 694 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 CR383658.1-201ENST00000514609 734 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 RN7SKP141-201ENST00000516167 338 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 RN7SKP238-201ENST00000516483 249 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AP003396.4-201ENST00000527574 265 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC016957.1-201ENST00000534895 309 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 MIR1273E-201ENST00000581165 102 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC012417.1-201ENST00000582307 1039 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC087683.1-201ENST00000591187 441 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC126118.1-201ENST00000607744 628 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC005021.1-201ENST00000608730 355 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 UGT2B24P-201ENST00000514441 1597 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AC019072.1-201ENST00000604535 1551 ntBASIC7.14□□□□□ -1.27
SYNGAP1Q96PV0 AL133243.2-201ENST00000610331 1621 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RNA5SP477-201ENST00000362639 119 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 U3.4-201ENST00000363352 213 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 MIR23A-201ENST00000385245 73 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RN7SKP263-201ENST00000411194 309 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RPS27P18-201ENST00000431701 247 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 TUBB4BP6-201ENST00000437576 479 ntBASIC7.13□□□□□ -1.27
SYNGAP1Q96PV0 RAB9AP5-201ENST00000437794 597 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms