Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTP4A1Q93096 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.95□□□□□ -1.62
PTP4A1Q93096 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTP4A1Q93096 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.95□□□□□ -1.62
PTP4A1Q93096 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
PTP4A1Q93096 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PTP4A1Q93096 AL034370.1-201ENST00000397254 1590 ntBASIC4.95□□□□□ -1.62
PTP4A1Q93096 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 RN7SKP247-201ENST00000411094 308 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 FAM204CP-201ENST00000424489 642 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 RPL7AP49-201ENST00000429522 581 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL591438.1-201ENST00000433508 581 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC092447.2-201ENST00000435487 669 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC006335.2-201ENST00000437993 330 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL138899.2-201ENST00000439139 499 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC090804.1-201ENST00000448870 490 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL445665.1-202ENST00000452436 324 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 RN7SL583P-201ENST00000475692 287 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 SYT14P1-201ENST00000481459 721 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 SNORA70.20-201ENST00000516848 126 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL512310.9-201ENST00000553311 948 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC068446.3-201ENST00000555285 382 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC090312.1-201ENST00000580637 348 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 CBX3P2-202ENST00000583365 535 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC108738.1-201ENST00000603703 237 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC025574.2-201ENST00000615621 514 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC037198.3-201ENST00000616754 526 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 MIR6778-201ENST00000617912 73 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AP001962.1-201ENST00000624114 559 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC024023.1-201ENST00000624530 922 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 FRG1EP-201ENST00000634469 770 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC006453.5-201ENST00000636451 619 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC106872.5-201ENST00000508856 1416 ntBASIC4.94□□□□□ -1.62
PTP4A1Q93096 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTP4A1Q93096 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.94□□□□□ -1.62
PTP4A1Q93096 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 OR52B3P-201ENST00000314715 928 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 MIR375-201ENST00000362103 64 ntBASIC4.93□□□□□ -1.62
PTP4A1Q93096 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PTP4A1Q93096 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.93□□□□□ -1.62
PTP4A1Q93096 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms