Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC108738.1-201ENST00000603703 237 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MEMO1P5-201ENST00000604810 406 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL391358.1-201ENST00000605342 190 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL139039.2-201ENST00000407436 479 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC009237.10-201ENST00000414112 510 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC009237.5-201ENST00000414271 501 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RSL24D1P6-201ENST00000426934 401 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 OR11H3P-201ENST00000554547 982 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MIR6716-201ENST00000613413 80 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC135068.5-201ENST00000624197 983 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC006967.1-201ENST00000467608 589 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SCARNA16.4-201ENST00000516956 187 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ATG4AP1-201ENST00000416893 538 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL389915.1-201ENST00000422463 466 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC093827.1-201ENST00000480094 861 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC016717.3-201ENST00000624730 554 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MAPK10-373ENST00000641983 6772 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 SNORD113.2-201ENST00000364166 89 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CHIAP3-201ENST00000423668 1133 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC068287.1-201ENST00000430283 295 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 GAPDHP25-201ENST00000447061 1001 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC008745.1-201ENST00000604064 271 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 UGT2B24P-201ENST00000514441 1597 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC119674.1-213ENST00000641177 1386 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RNU11-201ENST00000387069 134 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 BX276092.6-201ENST00000430476 250 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 BX276092.8-201ENST00000455722 250 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC109635.6-201ENST00000525487 1113 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AL360012.1-201ENST00000602813 131 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 AC079298.1-201ENST00000625026 1619 ntBASIC1.54□□□□□ -2.16
SYNE1Q8NF91 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SYNE1Q8NF91 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms