Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 RNU6-1005P-201ENST00000384519 107 ntBASIC5.86□□□□□ -1.47
COPAP53621 MT-TP-201ENST00000387461 68 ntBASIC5.86□□□□□ -1.47
COPAP53621 RPL5P19-201ENST00000404228 893 ntBASIC5.86□□□□□ -1.47
COPAP53621 ATF1P1-201ENST00000406040 927 ntBASIC5.86□□□□□ -1.47
COPAP53621 MIR1178-201ENST00000408396 91 ntBASIC5.86□□□□□ -1.47
COPAP53621 RPS3AP25-201ENST00000411660 793 ntBASIC5.86□□□□□ -1.47
COPAP53621 AL357752.1-201ENST00000412817 349 ntBASIC5.86□□□□□ -1.47
COPAP53621 AL445183.3-201ENST00000414168 502 ntBASIC5.86□□□□□ -1.47
COPAP53621 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.86□□□□□ -1.47
COPAP53621 AC008173.1-201ENST00000418901 264 ntBASIC5.86□□□□□ -1.47
COPAP53621 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 FO393414.1-201ENST00000428697 1184 ntBASIC5.86□□□□□ -1.47
COPAP53621 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 AC004854.1-201ENST00000440356 349 ntBASIC5.86□□□□□ -1.47
COPAP53621 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 AC023141.8-201ENST00000442554 208 ntBASIC5.86□□□□□ -1.47
COPAP53621 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.86□□□□□ -1.47
COPAP53621 DUXAP8-207ENST00000456786 622 ntBASIC5.86□□□□□ -1.47
COPAP53621 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 snoU109.3-201ENST00000459477 145 ntBASIC5.86□□□□□ -1.47
COPAP53621 PFN1P6-201ENST00000476786 399 ntBASIC5.86□□□□□ -1.47
COPAP53621 RPL38P3-201ENST00000484463 213 ntBASIC5.86□□□□□ -1.47
COPAP53621 MRPS16P1-201ENST00000523462 412 ntBASIC5.86□□□□□ -1.47
COPAP53621 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
COPAP53621 AL163952.1-202ENST00000569625 600 ntBASIC5.86□□□□□ -1.47
COPAP53621 MIR4260-201ENST00000583107 67 ntBASIC5.86□□□□□ -1.47
COPAP53621 CLIC4P2-201ENST00000601934 717 ntBASIC5.86□□□□□ -1.47
COPAP53621 DUXAP10-204ENST00000612052 616 ntBASIC5.86□□□□□ -1.47
COPAP53621 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 AL512427.1-201ENST00000618593 349 ntBASIC5.86□□□□□ -1.47
COPAP53621 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.86□□□□□ -1.47
COPAP53621 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
COPAP53621 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.86□□□□□ -1.47
COPAP53621 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
COPAP53621 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COPAP53621 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.85□□□□□ -1.47
COPAP53621 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 RN7SKP162-201ENST00000363605 345 ntBASIC5.85□□□□□ -1.47
COPAP53621 RN7SKP124-201ENST00000364730 341 ntBASIC5.85□□□□□ -1.47
COPAP53621 ATP5HP3-201ENST00000396994 486 ntBASIC5.85□□□□□ -1.47
COPAP53621 AP002784.2-201ENST00000397300 549 ntBASIC5.85□□□□□ -1.47
COPAP53621 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 RN7SKP278-201ENST00000410504 342 ntBASIC5.85□□□□□ -1.47
COPAP53621 VN1R51P-201ENST00000411675 945 ntBASIC5.85□□□□□ -1.47
COPAP53621 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 OR6E1P-201ENST00000414424 923 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 VTI1BP4-201ENST00000427516 527 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC005297.1-201ENST00000444765 862 ntBASIC5.85□□□□□ -1.47
COPAP53621 HMGB1P5-202ENST00000451497 985 ntBASIC5.85□□□□□ -1.47
COPAP53621 RPS3AP53-201ENST00000454716 778 ntBASIC5.85□□□□□ -1.47
COPAP53621 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 MRE11P1-201ENST00000464884 2127 ntBASIC5.85□□□□□ -1.47
COPAP53621 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 AC107398.1-201ENST00000486904 505 ntBASIC5.85□□□□□ -1.47
COPAP53621 PDCL3P4-201ENST00000489621 720 ntBASIC5.85□□□□□ -1.47
COPAP53621 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 UBE2V1P12-201ENST00000503954 474 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.85□□□□□ -1.47
COPAP53621 AC026407.1-201ENST00000518369 204 ntBASIC5.85□□□□□ -1.47
COPAP53621 IGHV3-63-201ENST00000518422 341 ntBASIC5.85□□□□□ -1.47
COPAP53621 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.85□□□□□ -1.47
COPAP53621 AP000916.1-201ENST00000533869 835 ntBASIC5.85□□□□□ -1.47
COPAP53621 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 AL049872.1-201ENST00000556323 322 ntBASIC5.85□□□□□ -1.47
COPAP53621 AL049838.1-201ENST00000563647 981 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms