Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 RN7SL647P-201ENST00000485429 300 ntBASIC7.43□□□□□ -1.22
VARSP26640 RPS3AP50-201ENST00000487064 803 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.43□□□□□ -1.22
VARSP26640 AC006390.1-201ENST00000508068 283 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 PTP4A1P4-201ENST00000512479 322 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC011352.2-201ENST00000514574 1016 ntBASIC7.43□□□□□ -1.22
VARSP26640 LY96-202ENST00000518893 430 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 COX4I1P1-201ENST00000554239 509 ntBASIC7.43□□□□□ -1.22
VARSP26640 BMS1P15-201ENST00000554269 1141 ntBASIC7.43□□□□□ -1.22
VARSP26640 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.43□□□□□ -1.22
VARSP26640 AC068714.1-201ENST00000559623 800 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 MIR4437-201ENST00000581331 60 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.43□□□□□ -1.22
VARSP26640 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 AC090241.1-201ENST00000587732 621 ntBASIC7.43□□□□□ -1.22
VARSP26640 AP001120.4-201ENST00000590231 108 ntBASIC7.43□□□□□ -1.22
VARSP26640 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.43□□□□□ -1.22
VARSP26640 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 CKS1BP3-201ENST00000600888 237 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC068790.5-201ENST00000602741 355 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC009027.1-201ENST00000604510 479 ntBASIC7.43□□□□□ -1.22
VARSP26640 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.43□□□□□ -1.22
VARSP26640 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
VARSP26640 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.43□□□□□ -1.22
VARSP26640 AC091925.1-201ENST00000623204 462 ntBASIC7.43□□□□□ -1.22
VARSP26640 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.43□□□□□ -1.22
VARSP26640 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
VARSP26640 MAPK10-365ENST00000641902 3825 ntBASIC7.43□□□□□ -1.22
VARSP26640 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
VARSP26640 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.43□□□□□ -1.22
VARSP26640 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.43□□□□□ -1.22
VARSP26640 AC034111.1-201ENST00000562143 3770 ntBASIC7.43□□□□□ -1.22
VARSP26640 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
VARSP26640 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
VARSP26640 AL592429.1-201ENST00000403909 1473 ntBASIC7.43□□□□□ -1.22
VARSP26640 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 AC022507.1-201ENST00000548349 1505 ntBASIC7.42□□□□□ -1.22
VARSP26640 AP000473.2-201ENST00000602659 1537 ntBASIC7.42□□□□□ -1.22
VARSP26640 AL445250.1-203ENST00000641829 1535 ntBASIC7.42□□□□□ -1.22
VARSP26640 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 AC122713.2-201ENST00000624942 3335 ntBASIC7.42□□□□□ -1.22
VARSP26640 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.42□□□□□ -1.22
VARSP26640 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 AC005261.2-201ENST00000593427 4258 ntBASIC7.42□□□□□ -1.22
VARSP26640 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 AC093909.5-201ENST00000621839 1799 ntBASIC7.42□□□□□ -1.22
VARSP26640 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VARSP26640 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 SNORA22B-201ENST00000383876 138 ntBASIC7.42□□□□□ -1.22
VARSP26640 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.42□□□□□ -1.22
VARSP26640 ELOCP4-201ENST00000420090 333 ntBASIC7.42□□□□□ -1.22
VARSP26640 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
VARSP26640 AL589872.1-201ENST00000426602 288 ntBASIC7.42□□□□□ -1.22
VARSP26640 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.42□□□□□ -1.22
VARSP26640 RPL36AP53-201ENST00000432891 316 ntBASIC7.42□□□□□ -1.22
VARSP26640 IFNA20P-201ENST00000436840 528 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC231532.1-201ENST00000438584 312 ntBASIC7.42□□□□□ -1.22
VARSP26640 CBX1P1-201ENST00000440184 427 ntBASIC7.42□□□□□ -1.22
VARSP26640 AL161454.1-201ENST00000446226 569 ntBASIC7.42□□□□□ -1.22
VARSP26640 RPL26P28-201ENST00000451325 435 ntBASIC7.42□□□□□ -1.22
VARSP26640 RPS29P5-201ENST00000452777 171 ntBASIC7.42□□□□□ -1.22
VARSP26640 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.42□□□□□ -1.22
VARSP26640 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.42□□□□□ -1.22
VARSP26640 RN7SL861P-201ENST00000473793 285 ntBASIC7.42□□□□□ -1.22
VARSP26640 AC090638.1-201ENST00000498296 909 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms