Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC2.94□□□□□ -1.94
APOBP04114 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC2.94□□□□□ -1.94
APOBP04114 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC2.94□□□□□ -1.94
APOBP04114 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.94□□□□□ -1.94
APOBP04114 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC2.94□□□□□ -1.94
APOBP04114 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC2.94□□□□□ -1.94
APOBP04114 AC245060.6-201ENST00000624350 8420 ntBASIC2.94□□□□□ -1.94
APOBP04114 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
APOBP04114 SNORA73.1-201ENST00000363107 205 ntBASIC2.94□□□□□ -1.94
APOBP04114 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.94□□□□□ -1.94
APOBP04114 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC2.94□□□□□ -1.94
APOBP04114 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC2.94□□□□□ -1.94
APOBP04114 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 FTH1P25-201ENST00000447665 469 ntBASIC2.94□□□□□ -1.94
APOBP04114 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC2.94□□□□□ -1.94
APOBP04114 AL022401.1-201ENST00000619498 108 ntBASIC2.94□□□□□ -1.94
APOBP04114 AC090506.2-201ENST00000624521 419 ntBASIC2.94□□□□□ -1.94
APOBP04114 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC2.94□□□□□ -1.94
APOBP04114 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC2.94□□□□□ -1.94
APOBP04114 AP000756.2-201ENST00000624168 2567 ntBASIC2.94□□□□□ -1.94
APOBP04114 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
APOBP04114 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC2.94□□□□□ -1.94
APOBP04114 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
APOBP04114 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
APOBP04114 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 RNU1-94P-201ENST00000362627 173 ntBASIC2.93□□□□□ -1.94
APOBP04114 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
APOBP04114 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 AC008280.1-201ENST00000418851 412 ntBASIC2.93□□□□□ -1.94
APOBP04114 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 AC106782.4-201ENST00000568264 210 ntBASIC2.93□□□□□ -1.94
APOBP04114 AP005901.4-201ENST00000577336 569 ntBASIC2.93□□□□□ -1.94
APOBP04114 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 AC093671.1-201ENST00000624981 2929 ntBASIC2.93□□□□□ -1.94
APOBP04114 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 AC032011.1-201ENST00000611703 1549 ntBASIC2.93□□□□□ -1.94
APOBP04114 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 AC011447.7-201ENST00000624228 1590 ntBASIC2.93□□□□□ -1.94
APOBP04114 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 AL022722.2-201ENST00000402519 180 ntBASIC2.93□□□□□ -1.94
APOBP04114 AC018644.1-201ENST00000429934 551 ntBASIC2.93□□□□□ -1.94
APOBP04114 RRM2P4-201ENST00000441721 562 ntBASIC2.93□□□□□ -1.94
APOBP04114 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC2.93□□□□□ -1.94
APOBP04114 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBP04114 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
APOBP04114 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC2.93□□□□□ -1.94
APOBP04114 AC091868.1-201ENST00000508746 304 ntBASIC2.93□□□□□ -1.94
APOBP04114 AC006499.6-201ENST00000511169 607 ntBASIC2.93□□□□□ -1.94
APOBP04114 AP001160.4-201ENST00000596971 382 ntBASIC2.93□□□□□ -1.94
APOBP04114 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 CARF-203ENST00000414439 2099 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 AC097374.1-203ENST00000400783 485 ntBASIC2.93□□□□□ -1.94
APOBP04114 RNU6-628P-201ENST00000410675 107 ntBASIC2.93□□□□□ -1.94
APOBP04114 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC2.93□□□□□ -1.94
APOBP04114 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.93□□□□□ -1.94
APOBP04114 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.93□□□□□ -1.94
APOBP04114 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC2.93□□□□□ -1.94
APOBP04114 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC2.93□□□□□ -1.94
APOBP04114 FAM27B-201ENST00000610601 213 ntBASIC2.93□□□□□ -1.94
APOBP04114 AC108359.1-201ENST00000616451 1211 ntBASIC2.93□□□□□ -1.94
APOBP04114 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
APOBP04114 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms