Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC22BO75396 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC22BO75396 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SEC22BO75396 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SEC22BO75396 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.09□□□□□ -1.6
SEC22BO75396 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SEC22BO75396 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.09□□□□□ -1.6
SEC22BO75396 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SEC22BO75396 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.09□□□□□ -1.6
SEC22BO75396 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 PHKBP1-201ENST00000450951 1951 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 RNA5SP284-201ENST00000384547 118 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 RNU6-603P-201ENST00000411403 107 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 SDHDP6-201ENST00000414693 480 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 TRGV6-201ENST00000417928 299 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC22BO75396 MTND6P12-201ENST00000428247 522 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC22BO75396 NOP56P2-201ENST00000447491 769 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC22BO75396 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC079168.1-201ENST00000458741 345 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 RPL7P40-201ENST00000481703 745 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.08□□□□□ -1.6
SEC22BO75396 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 CDH12P2-201ENST00000504393 298 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 YWHABP2-201ENST00000540201 713 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
SEC22BO75396 AC022884.2-201ENST00000578535 580 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC011626.1-201ENST00000604710 562 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC000068.2-201ENST00000608816 460 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AL359742.1-201ENST00000622497 540 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.08□□□□□ -1.6
SEC22BO75396 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SEC22BO75396 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.08□□□□□ -1.6
SEC22BO75396 OR5AC4P-202ENST00000642086 985 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 SAMMSON-227ENST00000642114 1199 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SEC22BO75396 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 AC007382.1-201ENST00000624376 2618 ntBASIC5.08□□□□□ -1.6
SEC22BO75396 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.08□□□□□ -1.6
SEC22BO75396 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.07□□□□□ -1.6
SEC22BO75396 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEC22BO75396 AC090971.4-201ENST00000560291 1800 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SEC22BO75396 RNA5SP223-201ENST00000365174 120 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 MIR421-201ENST00000365696 85 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SEC22BO75396 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC22BO75396 RNU6-152P-201ENST00000384037 107 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 MIR589-201ENST00000385238 99 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SEC22BO75396 OR4K12P-201ENST00000406538 961 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC22BO75396 GABARAPL3-201ENST00000412799 354 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.07□□□□□ -1.6
SEC22BO75396 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC22BO75396 OR6C64P-201ENST00000419708 825 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 MTCO1P57-201ENST00000432182 261 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 NDUFA5P1-201ENST00000433858 341 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.07□□□□□ -1.6
SEC22BO75396 RPL12P46-201ENST00000436610 195 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 GAPDHP58-201ENST00000438477 1006 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC22BO75396 AL390119.1-201ENST00000440329 312 ntBASIC5.07□□□□□ -1.6
SEC22BO75396 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.07□□□□□ -1.6
SEC22BO75396 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms