Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 MIR6867-201ENST00000610636 67 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 U3.53-201ENST00000628922 216 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RNA5SP366-201ENST00000365454 123 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RN7SL691P-201ENST00000494487 301 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC108064.1-201ENST00000513791 460 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 BX005214.3-202ENST00000619809 325 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 MIR383-201ENST00000362257 73 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AL583835.1-201ENST00000399570 407 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 RN7SKP33-201ENST00000410942 340 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC011933.1-201ENST00000413334 321 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AL356095.1-201ENST00000417217 199 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC140479.3-201ENST00000418944 1126 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC116533.1-201ENST00000459748 321 ntBASIC4.95□□□□□ -1.62
CHD7Q9P2D1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.95□□□□□ -1.62
CHD7Q9P2D1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AP003972.1-201ENST00000625192 5446 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 LINC00993-201ENST00000420453 540 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC108475.1-201ENST00000507880 950 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC091868.1-201ENST00000508746 304 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC007618.1-201ENST00000366455 732 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 OR1L6-202ENST00000373684 1044 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 OR13Z1P-201ENST00000416141 834 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 RRM2P4-201ENST00000441721 562 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AL121834.1-201ENST00000572284 509 ntBASIC4.94□□□□□ -1.62
CHD7Q9P2D1 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHD7Q9P2D1 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 TMSB10P2-201ENST00000416049 131 ntBASIC4.93□□□□□ -1.62
CHD7Q9P2D1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 AC006116.5-201ENST00000591936 559 ntBASIC4.93□□□□□ -1.62
CHD7Q9P2D1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC4.93□□□□□ -1.62
CHD7Q9P2D1 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms