Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 CASC19-206ENST00000641028 1430 ntBASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 AC006042.3-201ENST00000454684 1469 ntBASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 NLRP3P1-201ENST00000622303 1785 ntBASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
CCM2LQ9NUG4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 Y_RNA.465-201ENST00000384293 102 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 RNU5A-2P-201ENST00000384337 116 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AL445238.1-204ENST00000400311 463 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 RAP1BP1-201ENST00000412709 553 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC009518.2-201ENST00000418056 731 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 MTCO1P3-201ENST00000429327 192 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC073410.1-201ENST00000435125 589 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 FGF7P5-201ENST00000441829 291 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC010468.1-201ENST00000461022 817 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 BET1P1-201ENST00000482276 359 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC010198.2-201ENST00000550612 259 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 NIFKP8-201ENST00000560500 874 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AGGF1P7-201ENST00000562369 913 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC002310.3-201ENST00000569728 723 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 MIR4666A-201ENST00000580160 79 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC040904.1-201ENST00000590850 223 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC092608.3-201ENST00000625017 386 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 OR8B1P-202ENST00000641132 1178 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 TTC39DP-201ENST00000416781 1688 ntBASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CCM2LQ9NUG4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 DDX18P5-201ENST00000534547 1306 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 RNA5SP140-201ENST00000364524 92 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 RNA5SP485-201ENST00000365053 119 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 MIR1303-201ENST00000408625 86 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 RN7SKP59-201ENST00000410520 314 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AC090960.1-201ENST00000421072 306 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 NANOGP4-201ENST00000427230 913 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 FAM96AP1-201ENST00000430879 482 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AC007679.3-201ENST00000434035 414 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 GAPDHP59-201ENST00000435908 267 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 HMGB1P45-201ENST00000435986 653 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AC110602.1-201ENST00000437414 318 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 MRPL42P4-201ENST00000453267 443 ntBASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.86□□□□□ -1.47
CCM2LQ9NUG4 BX248409.1-201ENST00000455497 255 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms