Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR4278-201ENST00000636094 69 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL596275.2-208ENST00000641192 594 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 AL359715.4-201ENST00000606629 1436 ntBASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SHKBP1Q8TBC3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC087392.3-202ENST00000358446 1754 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CCAT2-201ENST00000630920 1752 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 Y_RNA.162-201ENST00000363683 102 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 RNA5SP433-201ENST00000364491 114 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 RNU4-12P-201ENST00000365233 139 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 RNU6-1009P-201ENST00000390996 107 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 GCNT1P4-201ENST00000404096 329 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 BTF3L4P3-201ENST00000418879 476 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL139413.1-201ENST00000421309 217 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC115283.1-201ENST00000427353 400 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CNOT7P1-201ENST00000429006 852 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 HMGN1P2-201ENST00000445197 310 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 PAXBP1P1-201ENST00000449315 447 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC011979.1-201ENST00000472300 483 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 GAPDHP36-201ENST00000480688 918 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 OR5AZ1P-201ENST00000527448 943 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL162632.2-201ENST00000553933 399 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC124916.2-201ENST00000604416 224 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL162730.1-201ENST00000605734 292 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 Z98200.1-201ENST00000607298 470 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AL357080.1-201ENST00000617394 239 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 PCMTD1P7-201ENST00000634506 357 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 LINC02495-203ENST00000636704 242 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC024614.3-201ENST00000637860 256 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CASC19-246ENST00000641625 1606 ntBASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHKBP1Q8TBC3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SHKBP1Q8TBC3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SHKBP1Q8TBC3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SHKBP1Q8TBC3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SHKBP1Q8TBC3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHKBP1Q8TBC3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms