Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 STAG3L4-201ENST00000352103 530 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 Y_RNA.97-201ENST00000363094 102 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 RN7SKP55-201ENST00000364888 307 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 BMS1P19-201ENST00000433925 393 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 RPL37P21-201ENST00000435890 276 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AL451074.3-201ENST00000437709 472 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 PMS2P11-201ENST00000451831 574 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 RPL7P48-201ENST00000461513 746 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 HMGN1P12-201ENST00000499125 195 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC098799.3-201ENST00000506095 438 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC008083.2-201ENST00000546707 476 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AL157687.1-201ENST00000554853 619 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 TRAV15-201ENST00000556680 249 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 RPSAP66-201ENST00000592196 606 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC005261.5-201ENST00000596280 355 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC115286.1-201ENST00000604298 434 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 CR382285.1-202ENST00000604687 547 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC010200.2-201ENST00000605098 235 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC234782.5-201ENST00000617723 324 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC020978.6-201ENST00000571197 3177 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 AC005261.2-201ENST00000593427 4258 ntBASIC7.53□□□□□ -1.2
RNF135Q8IUD6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.53□□□□□ -1.2
RNF135Q8IUD6 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RNF135Q8IUD6 AP003119.3-201ENST00000566747 4192 ntBASIC7.52□□□□□ -1.2
RNF135Q8IUD6 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RNF135Q8IUD6 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RNF135Q8IUD6 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
RNF135Q8IUD6 BX284613.1-201ENST00000452221 1641 ntBASIC7.52□□□□□ -1.2
RNF135Q8IUD6 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC110716.2-201ENST00000563865 3945 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC095038.1-201ENST00000429248 1591 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RNU6-462P-201ENST00000362659 105 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RNA5SP152-201ENST00000365184 110 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 SNORA64.3-201ENST00000365647 134 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AL590004.1-201ENST00000405321 300 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 NACAP7-201ENST00000407371 609 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC114755.4-201ENST00000439114 443 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AL139156.3-201ENST00000454802 394 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RPL18AP17-201ENST00000455326 198 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 GAPDHP53-201ENST00000458397 924 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RN7SL751P-201ENST00000473281 284 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AL591122.1-201ENST00000487348 492 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AP005202.1-201ENST00000489915 867 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RN7SL306P-201ENST00000492941 296 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 RPS26P24-201ENST00000497656 331 ntBASIC7.52□□□□□ -1.21
RNF135Q8IUD6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.52□□□□□ -1.21
RNF135Q8IUD6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms