Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC073109.1-201ENST00000445066 978 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC108463.1-201ENST00000450258 347 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 BZW1P1-201ENST00000454901 1240 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC091133.4-201ENST00000511142 308 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 snoZ278.1-201ENST00000517059 112 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL121821.2-201ENST00000556081 394 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC004232.1-201ENST00000571388 208 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 BNIP3P22-201ENST00000593399 556 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL160413.1-201ENST00000622780 310 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 AL008638.3-201ENST00000623027 5182 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.31□□□□□ -1.08
RC3H1Q5TC82 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
RC3H1Q5TC82 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL022578.1-201ENST00000439330 1433 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RNA5SP65-201ENST00000363166 119 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RNU6-839P-201ENST00000363347 108 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RNU6-697P-201ENST00000363348 107 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RN7SKP69-201ENST00000365390 305 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL031985.1-201ENST00000392713 418 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RPL7P24-201ENST00000493052 752 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC025458.1-201ENST00000506046 166 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 SCARNA21.2-201ENST00000516600 166 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AP002453.2-201ENST00000533503 320 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC079905.1-201ENST00000549280 475 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 ARL2BPP2-201ENST00000550907 489 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC092332.1-201ENST00000563684 829 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 RN7SL475P-201ENST00000583379 298 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC012065.4-201ENST00000602445 679 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 SEPT7P9-203ENST00000604116 343 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC073046.2-201ENST00000604756 527 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AL445264.1-201ENST00000621719 171 ntBASIC8.3□□□□□ -1.08
RC3H1Q5TC82 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
RC3H1Q5TC82 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms