Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 RNU4-51P-201ENST00000364206 140 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 RNU4-4P-201ENST00000364588 130 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 RNU1-59P-201ENST00000364829 162 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 OOSP1-201ENST00000398992 1270 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 ST13P16-201ENST00000401760 781 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC124944.2-201ENST00000429866 1242 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 RPS24P1-201ENST00000438550 371 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL138899.2-201ENST00000439139 499 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC245517.2-201ENST00000442890 346 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 PTENP1-201ENST00000447117 1215 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL603882.1-201ENST00000463059 681 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC115223.1-201ENST00000466377 870 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 PFN1P6-201ENST00000476786 399 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 HMGB1P3-201ENST00000502802 616 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 LTV1P1-201ENST00000510683 1237 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 WBP1LP3-201ENST00000523033 208 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AP000648.1-201ENST00000529682 397 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 NANOGNBP2-201ENST00000544753 553 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC068305.2-201ENST00000550567 1205 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC091078.2-201ENST00000557145 559 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 TXNP4-201ENST00000575018 310 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC005726.4-201ENST00000582858 458 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC015802.2-201ENST00000589690 189 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC125494.3-201ENST00000602759 455 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL138895.2-201ENST00000603019 178 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 MTCO3P22-201ENST00000603219 784 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 MTND3P19-201ENST00000603825 345 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC145423.1-201ENST00000605712 336 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 RN7SKP299-201ENST00000606679 301 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AP000255.1-201ENST00000610276 676 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AL352984.2-202ENST00000613699 155 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 U1.25-201ENST00000614085 162 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 U1.34-201ENST00000618578 162 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 U1.31-201ENST00000620022 160 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC069234.4-201ENST00000621276 412 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC091932.2-201ENST00000623014 291 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 AC132825.8-201ENST00000640783 297 ntBASIC6.51□□□□□ -1.37
NCKAP1LP55160 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NCKAP1LP55160 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
NCKAP1LP55160 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 AP000641.1-201ENST00000531988 1639 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 AC005224.3-201ENST00000584683 2140 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NCKAP1LP55160 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NCKAP1LP55160 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NCKAP1LP55160 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 AC111188.2-201ENST00000529697 1387 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 SNORD1C-201ENST00000363315 78 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 OR5H15-201ENST00000383696 930 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 Y_RNA.472-201ENST00000384322 102 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 RAB5CP1-201ENST00000395972 580 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 MIR1203-201ENST00000408812 85 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 MTND4P3-201ENST00000417829 541 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 ARAFP1-201ENST00000422172 605 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 AC011233.1-201ENST00000422812 283 ntBASIC6.5□□□□□ -1.37
NCKAP1LP55160 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.5□□□□□ -1.37
NCKAP1LP55160 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms