Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC12P31275 RNF6P1-201ENST00000444889 1784 ntBASIC6.06□□□□□ -1.44
HOXC12P31275 AC104837.1-201ENST00000444644 1587 ntBASIC6.06□□□□□ -1.44
HOXC12P31275 AC011447.7-201ENST00000624228 1590 ntBASIC6.06□□□□□ -1.44
HOXC12P31275 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.06□□□□□ -1.44
HOXC12P31275 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HOXC12P31275 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AL121657.1-201ENST00000327215 531 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 RNU6-839P-201ENST00000363347 108 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 RN7SKP15-201ENST00000364742 309 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 RNY3P10-201ENST00000384764 102 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 TMSB4XP8-201ENST00000402089 135 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 TMSB4XP6-201ENST00000415187 135 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 GAPDHP57-201ENST00000424400 585 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 TMSB4XP1-201ENST00000424567 135 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC007559.1-201ENST00000428736 355 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 SKP1P3-201ENST00000429280 487 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC12P31275 RPS7P5-201ENST00000441482 581 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 TCEA1P3-201ENST00000443005 880 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC092601.1-201ENST00000444526 383 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC023271.1-201ENST00000445936 1090 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC12P31275 DNAJB5P1-201ENST00000454004 806 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 CR383656.1-201ENST00000484916 377 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
HOXC12P31275 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC006499.4-201ENST00000510947 694 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC12P31275 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.05□□□□□ -1.44
HOXC12P31275 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 ULK4P1-202ENST00000565174 503 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.05□□□□□ -1.44
HOXC12P31275 RN7SL199P-201ENST00000578752 281 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 RN7SL656P-201ENST00000579044 281 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 RN7SL404P-201ENST00000582421 281 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC090312.2-201ENST00000582687 378 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC011921.2-201ENST00000589465 152 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 VN1R92P-201ENST00000598511 928 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC068276.1-201ENST00000605793 379 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC055764.2-201ENST00000610089 670 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 AC025594.3-201ENST00000613068 790 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AL121873.1-201ENST00000616013 524 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 MIR7844-201ENST00000616161 122 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 AL356266.1-201ENST00000623311 483 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HOXC12P31275 MIR1910-201ENST00000636955 80 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 LINC01739-205ENST00000641890 573 ntBASIC6.05□□□□□ -1.44
HOXC12P31275 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.05□□□□□ -1.44
HOXC12P31275 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
HOXC12P31275 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.05□□□□□ -1.44
HOXC12P31275 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HOXC12P31275 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms