Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC006600.2-201ENST00000624834 2506 ntBASIC5.11□□□□□ -1.59
TNFRSF1BP20333 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 RNA5SP187-201ENST00000384400 119 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NEPNP-201ENST00000404786 1371 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 MTCO3P4-201ENST00000419236 787 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC127526.2-201ENST00000426436 775 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 SRRM1P3-201ENST00000426911 2678 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC093166.3-201ENST00000448785 303 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 PSAT1P4-201ENST00000466500 526 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC105918.1-201ENST00000474399 838 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC025458.1-201ENST00000506046 166 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 HMGN1P9-201ENST00000515212 298 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 MRPS16P1-201ENST00000523462 412 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 OR10V3P-201ENST00000525712 725 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC006512.2-201ENST00000543250 486 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC002310.3-201ENST00000569728 723 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 MIR744-201ENST00000578242 98 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 RN7SL290P-201ENST00000578661 300 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 MIR4433B-201ENST00000581329 102 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL078595.2-201ENST00000605309 1780 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL355578.1-201ENST00000607405 1328 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC008432.1-201ENST00000615912 1320 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC078883.4-201ENST00000623218 367 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 OR8G3P-202ENST00000641572 1255 ntBASIC5.1□□□□□ -1.59
TNFRSF1BP20333 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
TNFRSF1BP20333 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 ZNF90P1-201ENST00000480493 1951 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC002525.1-201ENST00000624392 1622 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AP000473.2-201ENST00000602659 1537 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC099786.3-201ENST00000565735 1410 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 RNU1-65P-201ENST00000363919 148 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 NPM1P38-201ENST00000403835 865 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 TXNL1P1-201ENST00000429528 554 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 MTCO1P43-201ENST00000431831 488 ntBASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TNFRSF1BP20333 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms