Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 BNIP3P31-201ENST00000604515 566 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AL391834.2-201ENST00000609982 546 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC079395.2-201ENST00000610982 737 ntBASIC5.19□□□□□ -1.58
CDH1P12830 AC007204.2-201ENST00000615022 616 ntBASIC5.19□□□□□ -1.58
CDH1P12830 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 AC010872.1-201ENST00000624225 675 ntBASIC5.19□□□□□ -1.58
CDH1P12830 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH1P12830 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH1P12830 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH1P12830 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH1P12830 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CDH1P12830 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 RNA5SP132-201ENST00000364725 118 ntBASIC5.18□□□□□ -1.58
CDH1P12830 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 OR4K12P-201ENST00000406538 961 ntBASIC5.18□□□□□ -1.58
CDH1P12830 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.18□□□□□ -1.58
CDH1P12830 RN7SKP59-201ENST00000410520 314 ntBASIC5.18□□□□□ -1.58
CDH1P12830 ARAFP1-201ENST00000422172 605 ntBASIC5.18□□□□□ -1.58
CDH1P12830 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 AL121776.1-201ENST00000429337 372 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 FTLP19-201ENST00000433300 394 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 CYCSP12-201ENST00000437729 300 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 RPL7P45-201ENST00000455851 743 ntBASIC5.18□□□□□ -1.58
CDH1P12830 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.18□□□□□ -1.58
CDH1P12830 SUMO2P4-201ENST00000504193 276 ntBASIC5.18□□□□□ -1.58
CDH1P12830 RPEP1-201ENST00000504507 658 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC093763.2-201ENST00000505334 1223 ntBASIC5.18□□□□□ -1.58
CDH1P12830 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 AC108157.1-201ENST00000510511 539 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 IMPA1P1-201ENST00000510718 842 ntBASIC5.18□□□□□ -1.58
CDH1P12830 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 HMGB1P40-201ENST00000525121 540 ntBASIC5.18□□□□□ -1.58
CDH1P12830 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 CKS1BP1-201ENST00000555221 240 ntBASIC5.18□□□□□ -1.58
CDH1P12830 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 RPAP2P1-201ENST00000603626 1168 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC009027.1-201ENST00000604510 479 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC120053.1-201ENST00000607706 736 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AL359513.1-201ENST00000614364 557 ntBASIC5.18□□□□□ -1.58
CDH1P12830 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.18□□□□□ -1.58
CDH1P12830 AL445493.3-201ENST00000619568 477 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.18□□□□□ -1.58
CDH1P12830 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 AC099654.6-201ENST00000636487 512 ntBASIC5.18□□□□□ -1.58
CDH1P12830 SAMMSON-227ENST00000642114 1199 ntBASIC5.18□□□□□ -1.58
CDH1P12830 MTND4P9-201ENST00000507819 1346 ntBASIC5.18□□□□□ -1.58
CDH1P12830 ICE2P1-201ENST00000512800 1849 ntBASIC5.18□□□□□ -1.58
CDH1P12830 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.18□□□□□ -1.58
CDH1P12830 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CDH1P12830 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.18□□□□□ -1.58
CDH1P12830 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 RNU6-40P-201ENST00000384254 107 ntBASIC5.17□□□□□ -1.58
CDH1P12830 MIR620-201ENST00000385232 95 ntBASIC5.17□□□□□ -1.58
CDH1P12830 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH1P12830 AL356057.1-202ENST00000402263 756 ntBASIC5.17□□□□□ -1.58
CDH1P12830 RPL21P67-201ENST00000402896 478 ntBASIC5.17□□□□□ -1.58
CDH1P12830 OR3A2-201ENST00000408891 1076 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms