Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A1P02462 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A1P02462 COX5BP7-201ENST00000414780 274 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A1P02462 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A1P02462 AC007016.1-201ENST00000512110 244 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 AC026402.1-201ENST00000513642 170 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A1P02462 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A1P02462 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A1P02462 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A1P02462 MIR3160-1-201ENST00000577972 85 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A1P02462 MIR4284-201ENST00000578924 81 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 AC092451.3-201ENST00000625067 1343 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 CASC19-260ENST00000641828 2001 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A1P02462 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.84□□□□□ -1.48
COL4A1P02462 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A1P02462 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
COL4A1P02462 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A1P02462 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A1P02462 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A1P02462 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A1P02462 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A1P02462 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A1P02462 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.83□□□□□ -1.48
COL4A1P02462 AC134698.5-201ENST00000519444 336 ntBASIC5.83□□□□□ -1.48
COL4A1P02462 AGGF1P9-201ENST00000561884 913 ntBASIC5.83□□□□□ -1.48
COL4A1P02462 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 AL133338.2-201ENST00000604292 736 ntBASIC5.83□□□□□ -1.48
COL4A1P02462 VN2R3P-201ENST00000422626 1412 ntBASIC5.83□□□□□ -1.48
COL4A1P02462 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
COL4A1P02462 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A1P02462 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A1P02462 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL4A1P02462 UQCRBP1-201ENST00000421129 336 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 GTF2IP2-201ENST00000424290 697 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AC108751.3-201ENST00000461814 1020 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 AC012409.3-201ENST00000611343 981 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A1P02462 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A1P02462 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL4A1P02462 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.82□□□□□ -1.48
COL4A1P02462 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL4A1P02462 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A1P02462 TRIM51GP-201ENST00000534741 1350 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AC021146.4-201ENST00000309229 279 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL4A1P02462 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A1P02462 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL4A1P02462 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A1P02462 RPL23AP59-201ENST00000399415 461 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 RPL7AP25-201ENST00000423357 805 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 RGS17P1-201ENST00000423358 553 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AC109327.1-201ENST00000471666 403 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A1P02462 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.82□□□□□ -1.48
COL4A1P02462 CYCSP29-201ENST00000533731 318 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 TRAV8-5-201ENST00000537369 341 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL4A1P02462 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.82□□□□□ -1.48
COL4A1P02462 AL121932.1-201ENST00000605542 214 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 AP001029.2-203ENST00000589795 4910 ntBASIC5.82□□□□□ -1.48
COL4A1P02462 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
COL4A1P02462 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.81□□□□□ -1.48
COL4A1P02462 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A1P02462 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms