Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 MUC2-202ENST00000613187 4845 ntBASIC5.25□□□□□ -1.57
LDLRP01130 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 AC073136.1-201ENST00000449426 2884 ntBASIC5.25□□□□□ -1.57
LDLRP01130 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 MIR550A3-201ENST00000390735 95 ntBASIC5.25□□□□□ -1.57
LDLRP01130 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 ST13P16-201ENST00000401760 781 ntBASIC5.25□□□□□ -1.57
LDLRP01130 RBMY2KP-201ENST00000418221 992 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.25□□□□□ -1.57
LDLRP01130 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.25□□□□□ -1.57
LDLRP01130 RPL7P56-201ENST00000429441 717 ntBASIC5.25□□□□□ -1.57
LDLRP01130 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 AL772161.1-201ENST00000439130 476 ntBASIC5.25□□□□□ -1.57
LDLRP01130 SNRPFP2-201ENST00000440710 251 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC073850.1-201ENST00000449243 255 ntBASIC5.25□□□□□ -1.57
LDLRP01130 RPL35AP19-201ENST00000469425 329 ntBASIC5.25□□□□□ -1.57
LDLRP01130 RPS17P15-201ENST00000475609 349 ntBASIC5.25□□□□□ -1.57
LDLRP01130 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.25□□□□□ -1.57
LDLRP01130 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.25□□□□□ -1.57
LDLRP01130 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.25□□□□□ -1.57
LDLRP01130 AC024558.1-201ENST00000505008 528 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC147055.3-201ENST00000510547 851 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC091912.1-201ENST00000511351 248 ntBASIC5.25□□□□□ -1.57
LDLRP01130 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.25□□□□□ -1.57
LDLRP01130 HMGB1P42-201ENST00000532126 553 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.25□□□□□ -1.57
LDLRP01130 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.25□□□□□ -1.57
LDLRP01130 AC127024.5-201ENST00000580085 462 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AL445222.1-201ENST00000607259 628 ntBASIC5.25□□□□□ -1.57
LDLRP01130 MIR6820-201ENST00000611508 62 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AL512506.1-201ENST00000613918 449 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC008147.4-201ENST00000617570 1204 ntBASIC5.25□□□□□ -1.57
LDLRP01130 AC091932.2-201ENST00000623014 291 ntBASIC5.25□□□□□ -1.57
LDLRP01130 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.25□□□□□ -1.57
LDLRP01130 AL353796.1-201ENST00000561542 3241 ntBASIC5.25□□□□□ -1.57
LDLRP01130 ADAM5-202ENST00000399789 1942 ntBASIC5.25□□□□□ -1.57
LDLRP01130 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LDLRP01130 TTC39DP-201ENST00000416781 1688 ntBASIC5.24□□□□□ -1.57
LDLRP01130 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LDLRP01130 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 AC008079.2-201ENST00000623543 20396 ntBASIC5.24□□□□□ -1.57
LDLRP01130 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 AC009804.1-201ENST00000400949 179 ntBASIC5.24□□□□□ -1.57
LDLRP01130 MRPL53P1-201ENST00000414323 319 ntBASIC5.24□□□□□ -1.57
LDLRP01130 NIFKP3-201ENST00000417799 865 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 AL022331.1-201ENST00000429025 477 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC005297.1-201ENST00000444765 862 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AL450996.1-201ENST00000445574 1202 ntBASIC5.24□□□□□ -1.57
LDLRP01130 RAB28P3-201ENST00000448325 597 ntBASIC5.24□□□□□ -1.57
LDLRP01130 BUD31P2-201ENST00000449374 300 ntBASIC5.24□□□□□ -1.57
LDLRP01130 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 EIF2S2P5-201ENST00000457635 968 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC104629.2-201ENST00000468627 598 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC100832.1-201ENST00000471945 383 ntBASIC5.24□□□□□ -1.57
LDLRP01130 RN7SL808P-201ENST00000496066 299 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC025768.1-201ENST00000510057 267 ntBASIC5.24□□□□□ -1.57
LDLRP01130 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.24□□□□□ -1.57
LDLRP01130 RNU6-889P-201ENST00000517189 103 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.24□□□□□ -1.57
LDLRP01130 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
LDLRP01130 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.24□□□□□ -1.57
LDLRP01130 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 DPPA2P4-201ENST00000563717 878 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.24□□□□□ -1.57
LDLRP01130 AC104785.1-201ENST00000603220 588 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AC067838.1-201ENST00000606064 577 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AL355802.4-201ENST00000607635 548 ntBASIC5.24□□□□□ -1.57
LDLRP01130 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 AC005840.5-201ENST00000619166 599 ntBASIC5.24□□□□□ -1.57
LDLRP01130 uc_338.7-201ENST00000621834 124 ntBASIC5.24□□□□□ -1.57
LDLRP01130 AP002371.2-201ENST00000624450 503 ntBASIC5.24□□□□□ -1.57
LDLRP01130 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
LDLRP01130 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LDLRP01130 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LDLRP01130 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms