Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL356981.1-201ENST00000454879 684 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN2BO60939 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.82□□□□□ -1.64
SCN2BO60939 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCN2BO60939 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.82□□□□□ -1.64
SCN2BO60939 BNIP3P1-201ENST00000547295 580 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN2BO60939 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 AC136428.4-201ENST00000634254 1155 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 AL049767.1-202ENST00000637826 242 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN2BO60939 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SCN2BO60939 PCAT14-202ENST00000627127 3935 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 PANDAR-201ENST00000629595 1506 ntBASIC4.82□□□□□ -1.64
SCN2BO60939 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.82□□□□□ -1.64
SCN2BO60939 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN2BO60939 AC027279.1-201ENST00000568885 4284 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN2BO60939 SNORA67-201ENST00000384423 137 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN2BO60939 AC005522.1-201ENST00000395416 346 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN2BO60939 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SCN2BO60939 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN2BO60939 BX323845.1-201ENST00000432417 179 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AL450023.3-201ENST00000440592 271 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AC007386.1-201ENST00000455212 582 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 RN7SL174P-201ENST00000475578 289 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 PGAM1P13-201ENST00000507497 754 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.81□□□□□ -1.64
SCN2BO60939 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SCN2BO60939 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
SCN2BO60939 NDUFB4P11-201ENST00000560510 395 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.81□□□□□ -1.64
SCN2BO60939 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
SCN2BO60939 AC015849.6-201ENST00000605454 474 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AC079395.2-201ENST00000610982 737 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SCN2BO60939 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCN2BO60939 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 THAP12P8-201ENST00000447914 2115 ntBASIC4.81□□□□□ -1.64
SCN2BO60939 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN2BO60939 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN2BO60939 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 RNA5SP435-201ENST00000364044 108 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SCN2BO60939 MIR1271-201ENST00000408537 86 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 OR6C64P-201ENST00000419708 825 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN2BO60939 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 AL391987.1-201ENST00000441025 200 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 AC004980.3-201ENST00000447046 365 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 NPM1P39-201ENST00000449818 867 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.8□□□□□ -1.64
SCN2BO60939 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 RNA5SP362-201ENST00000516048 118 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 AL390726.5-202ENST00000564800 256 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.8□□□□□ -1.64
SCN2BO60939 MIR4310-201ENST00000582950 57 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AC109309.2-201ENST00000612597 332 ntBASIC4.8□□□□□ -1.64
SCN2BO60939 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCN2BO60939 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.8□□□□□ -1.64
SCN2BO60939 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms