Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 RNU5E-10P-201ENST00000363506 118 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 RNU6-207P-201ENST00000384137 107 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 MT-TP-201ENST00000387461 68 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ZIC3O60481 RN7SKP17-201ENST00000411242 351 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 NPM1P4-201ENST00000414095 812 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 PNRC2P1-201ENST00000423940 420 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 CFL1P1-202ENST00000432948 411 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 AC023512.1-201ENST00000444513 499 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 LINC02210-201ENST00000444561 288 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 RPL6P5-201ENST00000445678 828 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 IGBP1P3-201ENST00000447449 1000 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC069277.2-201ENST00000454211 432 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 DUXAP8-207ENST00000456786 622 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AL133445.1-201ENST00000467051 452 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 RN7SL188P-201ENST00000469842 285 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC012123.2-201ENST00000485809 248 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 SUMO2P5-201ENST00000506790 245 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 BX510359.5-201ENST00000515651 304 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC010376.1-201ENST00000522101 334 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 AC027026.1-201ENST00000532323 742 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 BLZF2P-201ENST00000553776 1130 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC007225.2-201ENST00000562529 256 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.96□□□□□ -1.62
ZIC3O60481 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ZIC3O60481 AC016839.1-201ENST00000578162 867 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 FKBP1AP1-201ENST00000594588 318 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 BNIP3P38-201ENST00000601117 544 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 AC013244.3-201ENST00000605614 388 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AP000894.4-201ENST00000610185 483 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 DUXAP10-204ENST00000612052 616 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 VN1R9P-201ENST00000614184 867 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 AC005840.5-201ENST00000619166 599 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.96□□□□□ -1.62
ZIC3O60481 AP000770.2-201ENST00000623694 100 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.96□□□□□ -1.62
ZIC3O60481 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.96□□□□□ -1.62
ZIC3O60481 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
ZIC3O60481 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.96□□□□□ -1.62
ZIC3O60481 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ZIC3O60481 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.96□□□□□ -1.62
ZIC3O60481 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ZIC3O60481 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 AC083899.1-201ENST00000454465 3819 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.95□□□□□ -1.62
ZIC3O60481 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 RNA5SP335-201ENST00000363817 110 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC234772.1-201ENST00000377927 937 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ZIC3O60481 CHMP1B2P-201ENST00000399581 597 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 RN7SKP59-201ENST00000410520 314 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 UBE2V1P9-201ENST00000414760 368 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 PTP4A1P7-201ENST00000423476 514 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 SRSF1P1-201ENST00000424058 520 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 RPS7P2-201ENST00000435134 607 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.95□□□□□ -1.62
ZIC3O60481 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 CALM1P2-201ENST00000452941 448 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 AC020779.1-201ENST00000478757 796 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC008427.1-201ENST00000503102 655 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC010374.1-201ENST00000503762 1237 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 SUMO2P4-201ENST00000504193 276 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC111000.6-201ENST00000514471 709 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms