Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 AL590763.1-201ENST00000398297 1545 ntBASIC6.96□□□□□ -1.3
SOX1O00570 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 MAPK10-261ENST00000641050 3109 ntBASIC6.95□□□□□ -1.3
SOX1O00570 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 XGY1-201ENST00000381172 446 ntBASIC6.95□□□□□ -1.3
SOX1O00570 RNU6-348P-201ENST00000384386 107 ntBASIC6.95□□□□□ -1.3
SOX1O00570 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 LARP1P1-201ENST00000407692 292 ntBASIC6.95□□□□□ -1.3
SOX1O00570 RPL23AP39-201ENST00000415533 405 ntBASIC6.95□□□□□ -1.3
SOX1O00570 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX1O00570 AL663061.1-201ENST00000416625 580 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AC019050.1-201ENST00000418508 492 ntBASIC6.95□□□□□ -1.3
SOX1O00570 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 RPS7P12-201ENST00000422385 582 ntBASIC6.95□□□□□ -1.3
SOX1O00570 GLRXP1-201ENST00000423261 334 ntBASIC6.95□□□□□ -1.3
SOX1O00570 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.95□□□□□ -1.3
SOX1O00570 AL121916.1-201ENST00000429405 308 ntBASIC6.95□□□□□ -1.3
SOX1O00570 FAM96AP1-201ENST00000430879 482 ntBASIC6.95□□□□□ -1.3
SOX1O00570 IGLV3-4-201ENST00000432300 244 ntBASIC6.95□□□□□ -1.3
SOX1O00570 YWHAZP2-201ENST00000440317 728 ntBASIC6.95□□□□□ -1.3
SOX1O00570 RPL7L1P11-201ENST00000446092 721 ntBASIC6.95□□□□□ -1.3
SOX1O00570 NANOGNBP1-201ENST00000448444 480 ntBASIC6.95□□□□□ -1.3
SOX1O00570 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX1O00570 AL133351.3-201ENST00000454998 193 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 AC115223.1-201ENST00000466377 870 ntBASIC6.95□□□□□ -1.3
SOX1O00570 PSAT1P4-201ENST00000466500 526 ntBASIC6.95□□□□□ -1.3
SOX1O00570 RN7SL329P-201ENST00000467740 299 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AL121769.1-201ENST00000469473 401 ntBASIC6.95□□□□□ -1.3
SOX1O00570 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 RN7SL466P-201ENST00000497546 295 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 ATP1B1P1-201ENST00000509767 915 ntBASIC6.95□□□□□ -1.3
SOX1O00570 RNU6-314P-201ENST00000516574 104 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.95□□□□□ -1.3
SOX1O00570 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 ANP32BP3-201ENST00000559213 706 ntBASIC6.95□□□□□ -1.3
SOX1O00570 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX1O00570 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.95□□□□□ -1.3
SOX1O00570 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 AP003115.1-201ENST00000569849 463 ntBASIC6.95□□□□□ -1.3
SOX1O00570 OR4K7P-201ENST00000580232 945 ntBASIC6.95□□□□□ -1.3
SOX1O00570 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX1O00570 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 AC023158.2-201ENST00000614876 543 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AC012414.7-202ENST00000622705 1090 ntBASIC6.95□□□□□ -1.3
SOX1O00570 DUXAP9-208ENST00000622815 614 ntBASIC6.95□□□□□ -1.3
SOX1O00570 AC024023.1-201ENST00000624530 922 ntBASIC6.95□□□□□ -1.3
SOX1O00570 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 RACGAP1P-201ENST00000550663 1879 ntBASIC6.95□□□□□ -1.3
SOX1O00570 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX1O00570 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX1O00570 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SOX1O00570 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX1O00570 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC6.94□□□□□ -1.3
SOX1O00570 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.94□□□□□ -1.3
SOX1O00570 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SOX1O00570 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms