Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SNORD46.1-201ENST00000364139 104 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AL162591.2-201ENST00000449634 317 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 HMGB1P4-201ENST00000455362 567 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AC022133.1-201ENST00000490961 571 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 RNU1-6P-201ENST00000516290 144 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 MTCO1P49-201ENST00000523429 802 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 STX3-208ENST00000641815 3236 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 AC002525.1-201ENST00000624392 1622 ntBASIC6.22□□□□□ -1.41
RGPD3A6NKT7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RGPD3A6NKT7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 RNU1-94P-201ENST00000362627 173 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 RN7SKP280-201ENST00000364196 304 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 RN7SKP267-201ENST00000410381 285 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 HSFY6P-201ENST00000445573 403 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AL691482.1-201ENST00000453255 87 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AP001267.4-201ENST00000602598 545 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AC090948.2-201ENST00000607363 564 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 AL445567.2-201ENST00000618935 498 ntBASIC6.21□□□□□ -1.41
RGPD3A6NKT7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RGPD3A6NKT7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
RGPD3A6NKT7 SNORA71.2-201ENST00000364941 134 ntBASIC6.21□□□□□ -1.42
RGPD3A6NKT7 BX842559.2-201ENST00000451418 605 ntBASIC6.21□□□□□ -1.42
RGPD3A6NKT7 AC069061.3-201ENST00000582254 823 ntBASIC6.21□□□□□ -1.42
RGPD3A6NKT7 AL022401.1-201ENST00000619498 108 ntBASIC6.21□□□□□ -1.42
RGPD3A6NKT7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 SNORA70.10-201ENST00000384515 134 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 RPS26P8-201ENST00000393490 348 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 RN7SL542P-201ENST00000467147 294 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AC007497.1-201ENST00000610421 561 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AL035461.2-201ENST00000619201 524 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AC087821.1-201ENST00000623639 567 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AC069542.2-201ENST00000624816 216 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 RNA5SP196-201ENST00000625967 102 ntBASIC6.2□□□□□ -1.42
RGPD3A6NKT7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RGPD3A6NKT7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RGPD3A6NKT7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms