Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TMEM88BA6NKF7 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC107982.1-201ENST00000507171 1300 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC005832.2-201ENST00000538921 1430 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 CYCSP46-201ENST00000423569 204 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC092017.2-201ENST00000427600 362 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 SSXP1-201ENST00000453640 473 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 DNAJC19P1-201ENST00000455312 319 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 RN7SL834P-201ENST00000461450 286 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC011825.1-201ENST00000484967 388 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 RN7SL193P-201ENST00000491708 276 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 SCARNA18.1-201ENST00000516330 83 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 HIGD1AP5-201ENST00000529959 259 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 OR7K1P-201ENST00000546439 926 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 PCNPP1-201ENST00000552501 511 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AL390816.3-201ENST00000604527 1066 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC138749.5-201ENST00000611461 208 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC234782.5-201ENST00000617723 324 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC124312.6-202ENST00000623624 418 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AP002364.1-201ENST00000623330 3386 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC034111.1-201ENST00000562143 3770 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 VPS35P1-201ENST00000563400 1518 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 AC092447.7-201ENST00000422212 1621 ntBASIC7.56□□□□□ -1.2
TMEM88BA6NKF7 CDR1-202ENST00000625883 1485 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AC109780.1-201ENST00000451768 1344 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 MAPK10-261ENST00000641050 3109 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 RN7SKP115-201ENST00000363177 317 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 Y_RNA.359-201ENST00000365498 102 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 AL132875.1-201ENST00000403623 949 ntBASIC7.55□□□□□ -1.2
TMEM88BA6NKF7 RPL23AP47-201ENST00000408017 460 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms