Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RNA5SP319-201ENST00000362768 119 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RNA5SP90-201ENST00000364801 99 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL121878.1-201ENST00000418638 859 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RPS3P2-201ENST00000421346 701 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC023141.6-201ENST00000429418 337 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF965P-201ENST00000432501 817 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC245517.2-201ENST00000442890 346 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 MTND2P30-201ENST00000456663 382 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RPSAP39-201ENST00000467439 883 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LARP7P4-201ENST00000481075 878 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RPL7P40-201ENST00000481703 745 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC097173.1-201ENST00000505862 819 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 UGT2A3P7-201ENST00000510485 734 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 TMEM97P2-201ENST00000517841 403 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC105031.1-201ENST00000518550 476 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AP003049.1-201ENST00000529418 457 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RPL10P14-201ENST00000565265 298 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC015720.2-201ENST00000567709 334 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 OR8G7P-201ENST00000616658 848 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC097372.4-201ENST00000625025 466 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL138820.1-201ENST00000617901 5305 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CDC27P2-201ENST00000425026 1922 ntBASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.74□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC023490.2-201ENST00000359859 470 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SNORD115-48-201ENST00000364764 76 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 OR8V1P-201ENST00000395193 873 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NPM1P40-201ENST00000412758 733 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 PTP4A1P1-201ENST00000420539 515 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 NAP1L4P2-201ENST00000425958 899 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC073508.1-201ENST00000428866 656 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 HMGN1P2-201ENST00000445197 310 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RPL36AP39-201ENST00000445859 318 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC073909.1-201ENST00000447112 999 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RN7SL168P-201ENST00000463821 279 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC074087.1-201ENST00000512059 724 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SNORD46.2-201ENST00000516021 102 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC005363.1-201ENST00000530779 351 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 MIR4472-2-201ENST00000582069 67 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 MIR4271-201ENST00000582451 67 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC010487.1-201ENST00000594408 1172 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AL499605.1-201ENST00000604628 403 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC242628.1-201ENST00000606810 391 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC025016.1-201ENST00000616746 682 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC020978.9-201ENST00000624380 1141 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC080188.3-201ENST00000624842 748 ntBASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRBV4-1A0A0J9YWV2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms