Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 KSR1P1-201ENST00000446298 240 ntBASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 AC093827.2-201ENST00000512654 315 ntBASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 AL049637.2-201ENST00000641778 930 ntBASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
DNMT3AQ9Y6K1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 NIFKP9-201ENST00000419265 221 ntBASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DNMT3AQ9Y6K1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DNMT3AQ9Y6K1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 AL445675.2-201ENST00000620291 557 ntBASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DNMT3AQ9Y6K1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
DNMT3AQ9Y6K1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DNMT3AQ9Y6K1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 AC112907.3-201ENST00000577781 2400 ntBASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.13■□□□□ 0.65
DNMT3AQ9Y6K1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms